EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS002-00667

Organism

Homo sapiens

Tissue/cell

A375

Coordinate

chr1:145152750-145153360

Target genes

Number: 16
Name	Ensembl ID

NBPF9	ENSG00000168614
PDE4DIP	ENSG00000178104
SEC22B	ENSG00000223380
NUDT4P1	ENSG00000177144
RP11	ENSG00000255168
NBPF10	ENSG00000163386
TXNIP	ENSG00000117289
POLR3GL	ENSG00000121851
ANKRD34A	ENSG00000181039
LIX1L	ENSG00000152022
RBM8A	ENSG00000131795
PEX11B	ENSG00000131779
ITGA10	ENSG00000143127
PIAS3	ENSG00000131788
NUDT17	ENSG00000186364
POLR3C	ENSG00000186141

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_00110	chr1:145152452-145157238	Adipose_Nuclei
SE_09153	chr1:145142524-145161533	CD14
SE_10500	chr1:145152541-145155962	CD19_Primary
SE_29892	chr1:145152656-145155257	Fetal_Muscle
SE_43504	chr1:145151471-145170496	MM1S
SE_45537	chr1:145150456-145166751	Osteoblasts
SE_53987	chr1:145152607-145155525	Spleen
SE_55651	chr1:145152502-145155300	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I148733

chr1

145152733

145155301

Enhancer Sequence

ACCAGTGGAA CTTGACTCCA TCGGGGAACT CTGGGAGACC TGTGTAGAAA GCATGCTTCA 60
GGGTTAAACC GCCTCATGGT TGAGCAAGCT GGGATATTTA TCTACTAACT CTCATCAGTC 120
ATTGGTTAAG GGTCTCTCCC AGGGAAAAGG GGGTTAATTC CCCAGCACTT CCTGAGCAAA 180
CTTTCAGTAG CTAGAAAAAG CCCTCAGGCA AACAGACATA TGTGCTGGCA GTTTTGAAGG 240
CCTGGATGTT AAGTGCCAAG AGAATTTGGG CAGGGCACTG ATGGCAAATG TTATATCTTC 300
CCTGCACTCT CTCTTAGGAA ACTACTGAAG AATGTGCTCC ACCAAAACAG TGTTGTGAGT 360
CAAGAAAGAG GAAGAGGCGG AATTCAGGAA CCAGAGCACT CAACACAGAG GTGAAGAGAG 420
TCCCCAGGAT GTGGGTAAAG GGAAGTCCCA AGATGACAGA TGCACAGCAG GCCTAGAGGT 480
CAGTTAGCCC AGAGAGGAGC AGATCAGTAG GCTCTGGAAG AGCTCTCTTC CAGATGAAAC 540
TGATGGAATA CCAAGTTTGT TTGGACATAT TGAGAGGAGA CTTAAACAAC TACAGAGGAG 600
TATGGATTAA 610