EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS002-00458

Organism

Homo sapiens

Tissue/cell

A375

Coordinate

chr1:66726630-66729080

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx3-2

MA0122.3

chr1:66727800-66727813

ATAACCACTTAAT

7.34

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_08075	chr1:66728416-66732726	Brain_Inferior_Temporal_Lobe
SE_33961	chr1:66725925-66729177	HCC1954
SE_34252	chr1:66725725-66734411	HCT-116
SE_46276	chr1:66727517-66728833	Osteoblasts
SE_51219	chr1:66726473-66734314	Skeletal_Muscle
SE_55746	chr1:66725883-66739898	u87
SE_59455	chr1:66712945-66767925	Ly3
SE_61005	chr1:66702198-66767701	HBL1
SE_67913	chr1:66725883-66739898	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I066260

chr1

66726159

66728929

Enhancer Sequence

AGATAGTTGT ATCTAATGAT CTTTCTCAAA TTCATACCCA TGTGTACAGA GTTGATCCTG 60
TTACTGATTG CAAGTACTAC CTTGTCACCA ACAAAAATTC AAGAGAGGGC ACATTTACCA 120
CTAGAGCTTC ACCAAAGGGA GTTGAGAGTG GTGCAGTCTA GCTCAGACTC AGTCCTGAAT 180
AATGGATTTC AGACATCAGG GAGCTGAAAT CAATGAAATC AATTAGCCAT CTCTGGAGCA 240
GTCTGGCAGG GGCAGGCTGG AAAACTGAGT GTCCATTTAA TGCACTCCAT TTTATTTCTA 300
GATAGTGAAT ACCTTCAAAC AACTAAAGAA AAGCCAAGAG AAGGAACTGA AGACAATAAT 360
GTTTGGCAGG AATGGATACA ACATACAGAA AGCATACCCC CACCCGAACA CACACACAGA 420
CACACACACA AACACTCACA CATATACACA GAGTTATCTT AACAGCTGAA ACTGTAGAAT 480
TCATGGAACT CAGATATTCC TTTCTGATAT ACTTGACTTC AGATCCAGGG TGCCACTCCC 540
TGCCTTGAAT GTAGCATTTA AGCAATAATT GTGTCCTAGG AGTGGTTTTC ATGAGACATC 600
TGGTTAGTGT GGTTTATTGT AGGAAAAGGA ACTCCCACAT AGAACTATAC TTCTCATAAG 660
TCAAGATTTC TTTTATCTTT TGGCTCTTTG CTGTGCATAA AAGCAGTCCA TTGTCTGCTT 720
GTGCTTTACC ACTCAAAGGG TGGAAATCTC AAAGTTCCTG TTGAGGTGGT TTCCTTGCAC 780
CTTCATGAAA TATCCCATTG AGGGATGCTT GATTGGACCT GTATTTCTTG GCTGCAAATT 840
AAAACCTACA CTTCCTTTGT CCCAGGAGTT AATTTTGAAA ATATGGCTTT CATTTAGAGT 900
TGTTAATTCA GATAAGCGTT CTTAAAGCAC TTGCTGACTT TAAACAGACT GCTGGAGTAA 960
TCAGGTGCGC AAGTGAGTGT GCCCACCATT CAGCAGTCTG ATAGCCAGGG GATGGAGCTG 1020
GGAGCAAATA GGTGTCATTT ATCAATCGAC TCTGTCATCA ACATCATGAA TGTCACCTGT 1080
GGCTATCAGG AAATAATGTA ACTTCTTTGT ATTAACATTC TTCCAAAGCA TAATTTAATG 1140
AACATGTATG TAATCTTCAG GAAAGAACTA ATAACCACTT AATTTTTTTA GTGCATATCT 1200
ATCCAAAATG TCTTTTATTG CTGTATGTAC TTTGGCATGT GAATTAAATT AACTGAGGAT 1260
CATAAAATGT TTAGCGTTCA GAGCTGGAAT GAACCTAGCC AAATTTCCTC AGATGAAGTG 1320
AAGCAACATA GGTAAAACTC CTCACACAGG ACTCAGTACG TTGTAAATCA CCAGTAAATG 1380
TTAGTTGCTG CCTGCTCTTC TCAAGTGAGG AAGAAACTAG GAGGTTCCGT GAATTGCCCA 1440
AGGGCTATAC AGTGGGAAGG TGCCAGAGCC AGGATTAGGA TTCCTGTCTT CTTAGTCACA 1500
GTCCAGTTCT GTCTCCACTG TGCTATTCAG GGCTGGAAAG TATGAACTGC TATGGCCATA 1560
TTATCTTCCC TATTTATATC ACCATCTTCA GCAATCAGCC ACGTAACTTC TTATGATTCT 1620
TCCATAAGTT ACGGACTTTG GAAACTGAGC AACCAATACC ACTTTCCTCT GGCATTCCTT 1680
ACAATTTTCT GTCTGGCATT CTCATGCCCT ACAAGCAATC ATGTGGCTTG CAGAAGTCAT 1740
TTATTCATTG AAAATGTATT GAGCCTCTTC TTTGCACCAG GTCTCATGAA TAATTGACAA 1800
ACCAAATAAA CATGGTCCCT GCCTTTCCAA AGCTTCCACA CAGAGATGCT TATCTGAATT 1860
GACAACTCTA AATAAAGCCA TATTTTCAAA ATTAACTTCT GAGACAAAAG AATTTGTATA 1920
GTATGAGTAA TTTCCAAGAA GTCATTGAGA GAATTAGGCA CTGTGATTTG ACACGCTATA 1980
AAGAAAGTAG AGATTTCTGA CATTTGGGGT CTCCTAGTTC AGTTTCTTCT TTCACAAAAG 2040
TCTTCTTTGG AACTCAGGAA AAGGTGTAAG ATAAAATTAT TAAAATGCAT TATTAATCCA 2100
GTGCGTATGT GTTGAGTACC TCCATCATAG CAAATATTAT GCCAGATCCC TGTGTTACAG 2160
TGGTGCACAA TGTTCAATCA TTGCTTAAAT TTCTCATAGA TGAGTTGAAG AGAAAGACAG 2220
GAAAATGGGA AATACAATAT AGAATGAGCA ATGCAGTGGT TCAGTAAGCA CAGGAAACTA 2280
CAGAACACAG GTGAGGGCCA CTCACAGAGG GAAGGCTCCT CTGAGGAGGT GATGCCTGAG 2340
CAGAGTCCTA GGACATATGA AAGAGCTAGC CACATAAAGA GAAGAAAAGT ATCCAACTGA 2400
GCAAAATGTG TGCAAAGGCA CAGCAACAAA AGAGAGTGCT GTGTTCGAGG 2450