| Tag | Content |
|---|
EnhancerAtlas ID | HS002-00267 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr1:33803930-33805030 |
Target genes | | Number: 13 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| INSM1 | MA0155.1 | chr1:33804145-33804157 | CGCCCCCTGCCA | - | 6.07 | | NEUROG2 | MA0669.1 | chr1:33804582-33804592 | AACATATGTC | + | 6.02 |
|
| | Number of super-enhancer constituents: 30 | ID | Coordinate | Tissue/cell |
| SE_01441 | chr1:33804035-33805373 | Adrenal_Gland | | SE_03193 | chr1:33802861-33805447 | Brain_Angular_Gyrus | | SE_03931 | chr1:33802554-33810219 | Brain_Anterior_Caudate | | SE_04902 | chr1:33802611-33810293 | Brain_Cingulate_Gyrus | | SE_05882 | chr1:33801630-33815355 | Brain_Hippocampus_Middle | | SE_06849 | chr1:33801860-33810192 | Brain_Hippocampus_Middle_150 | | SE_07821 | chr1:33802384-33815310 | Brain_Inferior_Temporal_Lobe | | SE_09063 | chr1:33804124-33804435 | Brain_Mid_Frontal_Lobe | | SE_09063 | chr1:33804538-33804872 | Brain_Mid_Frontal_Lobe | | SE_09063 | chr1:33804875-33805194 | Brain_Mid_Frontal_Lobe | | SE_25917 | chr1:33802548-33815316 | Duodenum_Smooth_Muscle | | SE_30304 | chr1:33803524-33805568 | Fetal_Muscle | | SE_31828 | chr1:33802923-33805539 | Gastric | | SE_33616 | chr1:33801798-33805614 | H2171 | | SE_36680 | chr1:33803189-33809597 | HMEC | | SE_37317 | chr1:33801521-33816569 | HSMMtube | | SE_40689 | chr1:33802694-33809749 | Left_Ventricle | | SE_42268 | chr1:33802727-33809759 | Lung | | SE_45059 | chr1:33802891-33805672 | NHLF | | SE_45933 | chr1:33792382-33815405 | Osteoblasts | | SE_47445 | chr1:33801645-33815285 | Panc1 | | SE_48345 | chr1:33802688-33811084 | Psoas_Muscle | | SE_48801 | chr1:33802772-33808947 | Right_Atrium | | SE_50397 | chr1:33802807-33809781 | Sigmoid_Colon | | SE_51341 | chr1:33802520-33815379 | Skeletal_Muscle | | SE_52897 | chr1:33802760-33809702 | Small_Intestine | | SE_53534 | chr1:33802737-33809796 | Spleen | | SE_54994 | chr1:33803198-33810114 | Stomach_Smooth_Muscle | | SE_56142 | chr1:33802998-33815590 | u87 | | SE_67607 | chr1:33802998-33815590 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | AACTCTTGCA CCACATTAGA AACTACCACT CCCCATTGTA ACCCAGGGCA GATCAAAGGA 60
GAGACAGAAT CCAAGGGACA GATGGGAGAG TGTTTTATGA ATATACAAAG GTTCACAGCT 120
ACTTCGCTTT GCAGTCATCT TGTAGACCAA TAGCTCCTCA TCTGCTTTAG TAACAAAGGA 180
GTTTGGGCTA TTCCTGGAAT GACCGAACAC AATCTCGCCC CCTGCCAAGC TCAGCACACT 240
GAGATTAATT TAATCTGCTT CCCGCTCTCC CAGACTGCTT TGCGGCCTTT GGGGAAAAGC 300
AGCTTAACAG TGAAACTTGC AGAAACCTGC CCTGCTGGCC CTGAGGCCAG ATAAAAGAGA 360
CAAAGAAATA CTCTGAATTT GGTTCCTTAC TCAATTCCCT TGACCAGTTC AGAGGCTATA 420
AGTGCTGCCG GGCATTCCCA CAGGTCTCAA ATGCCTGTAT ACAGTCAGGC ACCTGAAACC 480
GAAAGGTGGA GGCAGGATAA GGCCGATGGG AGAGGCTGGG GGAGGGGAGT AAAGCTAGGC 540
TTCGGTGGGG GAAGGGGGAG GTAAAATCTT GGCCTTTAGT TGACGCTGAC CACAAAGGGC 600
CAAGTATTCC GGTCAGAATG AACAGAGCAG CATGTTCCAC GGAGTCTTGC CTAACATATG 660
TCTCAACTTC TAGGCTGTTT CTCATTTCTG GTCTCATTCA CAGGCTCTGG TACAAACAGC 720
CCTTACAGGG GTGGGAGAAA ACAGGAAGGA CTACTCAGCT CCTGTTTGTG AAATTATCTG 780
CTTTGGGACT GGTCACGTCT CCTAAGCAGA GCAGACTTCT CTAGGCAGGG GGCTACCACT 840
CACTCAGTCA CCTCGAGATC TTCAGGGGCT AACCCCATGT CCAAAATATG ACAGGTGCTT 900
AATGACCACT AAACTGGAAT GTGTGGCATC CATGATCTCA GTCTTCACTG TCTACATATA 960
GAATACAGGG CTGCCTAGTG CCAAGATAAG CAATTTGGCA CTAGCTGAGA TTTACAAGTT 1020
GCTTTCTGAA GCTATGATGT TTTGAGAGCA GCTAGGCTGG TGGTACCTGC CTACCGGAGC 1080
GGCATTTCTA GATACCTGAT 1100
|
