Tag | Content |
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EnhancerAtlas ID | HS002-00145 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr1:21648530-21649490 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Mafb | MA0117.2 | chr1:21648635-21648647 | AGTCAGCATTAT | - | 6.14 | RFX1 | MA0509.2 | chr1:21648913-21648929 | AGTTGCCATGGAAACA | + | 6.59 | RFX1 | MA0509.2 | chr1:21648913-21648929 | AGTTGCCATGGAAACA | - | 6.61 | RFX2 | MA0600.2 | chr1:21648913-21648929 | AGTTGCCATGGAAACA | - | 6.88 | RFX2 | MA0600.2 | chr1:21648913-21648929 | AGTTGCCATGGAAACA | + | 6.93 | RFX5 | MA0510.2 | chr1:21648913-21648929 | AGTTGCCATGGAAACA | + | 6.82 | RFX5 | MA0510.2 | chr1:21648913-21648929 | AGTTGCCATGGAAACA | - | 6.85 |
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| Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
SE_00105 | chr1:21640019-21654616 | Adipose_Nuclei | SE_00854 | chr1:21648312-21655068 | Adrenal_Gland | SE_01643 | chr1:21648287-21650322 | Aorta | SE_02944 | chr1:21648411-21649480 | Bladder | SE_03598 | chr1:21648808-21649727 | Brain_Angular_Gyrus | SE_04518 | chr1:21648495-21649961 | Brain_Anterior_Caudate | SE_05710 | chr1:21648411-21650140 | Brain_Cingulate_Gyrus | SE_05944 | chr1:21646700-21650133 | Brain_Hippocampus_Middle | SE_08982 | chr1:21648806-21649085 | Brain_Mid_Frontal_Lobe | SE_26127 | chr1:21648785-21650184 | Duodenum_Smooth_Muscle | SE_26770 | chr1:21648517-21650210 | Esophagus | SE_28486 | chr1:21648752-21650291 | Fetal_Intestine | SE_29337 | chr1:21648632-21650262 | Fetal_Intestine_Large | SE_31433 | chr1:21648313-21650302 | Gastric | SE_42174 | chr1:21648286-21650213 | Lung | SE_45045 | chr1:21648683-21650142 | NHLF | SE_46660 | chr1:21648398-21649619 | Ovary | SE_47592 | chr1:21648448-21649521 | Pancreas | SE_48583 | chr1:21648288-21650187 | Right_Atrium | SE_50108 | chr1:21648573-21650164 | Sigmoid_Colon | SE_53334 | chr1:21648543-21650222 | Spleen | SE_54639 | chr1:21648366-21650199 | Stomach_Smooth_Muscle | SE_56171 | chr1:21648227-21650339 | u87 | SE_65263 | chr1:21643359-21649820 | Pancreatic_islets | SE_67931 | chr1:21648227-21650339 | u87 | SE_68932 | chr1:21648320-21650438 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I021312 | chr1 | 21638973 | 21657659 |
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Enhancer Sequence | GTCCCCGGCC ACCCTTTGGT CTGGTCTTGT CTCCCTCCTC CTCTGCCTGA AGCTCCCTCA 60 CTGCTGCCCC ACCTGGCTCA TGTCAGGAGC TGGAACAACT TCTGAAGTCA GCATTATATG 120 CCCCTTTTAC AGATGAAGAA ACAGGGGCTC AGAAAGAAGT GGCAAGGCGG CTTCTCAGTG 180 AGATGGAGTG GGGATGGGGG TGTGGATAAA ACCAGGAGAC CCCACACCCC ACCTGAGCCC 240 GGAGTGCAGC TCCCTCCCTA ACGGCTGGGG ACAGGTCAGT GCCACCCACC TCTAGCAAAT 300 GCTTCCATTC CCACAACCAT GGGCACCTTG TGGAGGACTT GGTAGCCCTT AGCCCAGCAG 360 ACGCCCAGGC AGCCTGGCTG CACAGTTGCC ATGGAAACAC CAGTGGGTTC TTTGGGGGCA 420 GGAGAGCAAC CAGCCCTTCT CACCTGGCCA GTGCAAGGCG CAGGCTGAGG CACAGGTTGG 480 GGCTGTGCCA GGCCCCCCAC ATGTGTCACA CTCCAGGGCC CCAGGCCTGT GACCAAAATG 540 GCAGTGCCAC TGCTGGCATA GGGGATGGGG ACACCAGTGT GGTGGCACTG TTTGGCCCTG 600 AGGGGTTGGA AGTTGATCTA ACCACCTAGC TGGGGAAAAG GACAAGAAAA CCCAGCGATG 660 GAGAGGAGAG GCACAGGAAA GGGGGCAGAC AGACAAGGGC CTCTTGTCAG GAAGGACAAG 720 AGGTTCTGAT CTAGCACTCT GCTGAGAGAA AGAAACGGGG AGGCCGGGAA GGGAAGTGGG 780 CATGGCCCCC GGAAGAGGAC GCACATGGAT CCGCCCTCTG CTGGAATTTG TGCATGTTTG 840 GTGAAAACCC CTCACTGGGG CTTTGGAGGG AGGGCAGGTC CCAGGGCTCA GGGGTTGGGG 900 TCATTTCCAA AAACAAGGCT GCTTACACTT TCCCAAAGCA CCCACATGGC AGAGGAGAGT 960
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