Tag | Content |
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EnhancerAtlas ID | HS002-00088 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr1:12493350-12495230 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXA1 | MA0148.4 | chr1:12494625-12494641 | GTTTGTTTATTTAGCC | - | 6.18 | RARA(var.2) | MA0730.1 | chr1:12493624-12493641 | GGGTCATTCCAAGTTCA | + | 6.12 | RUNX1 | MA0002.2 | chr1:12494493-12494504 | CTCTGTGGTTT | + | 6.14 | ZNF263 | MA0528.1 | chr1:12494025-12494046 | GGAGGAGGAGGAGGAGGAAAG | + | 10.19 | ZNF263 | MA0528.1 | chr1:12493951-12493972 | AGAGGAGGAGGTAGGGGGTGG | + | 6.36 | ZNF263 | MA0528.1 | chr1:12493954-12493975 | GGAGGAGGTAGGGGGTGGGGA | + | 7.37 | ZNF263 | MA0528.1 | chr1:12494028-12494049 | GGAGGAGGAGGAGGAAAGAAG | + | 8.13 | ZNF263 | MA0528.1 | chr1:12494022-12494043 | TGTGGAGGAGGAGGAGGAGGA | + | 8.15 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_00009 | chr1:12492605-12496972 | Adipose_Nuclei | SE_01743 | chr1:12492493-12494609 | Aorta | SE_03005 | chr1:12493307-12494046 | Bladder | SE_03005 | chr1:12494394-12494761 | Bladder | SE_15065 | chr1:12492619-12497585 | CD4_Memory_Primary_7pool | SE_20910 | chr1:12492967-12497444 | CD8_Memory_7pool | SE_26086 | chr1:12493139-12494968 | Duodenum_Smooth_Muscle | SE_26716 | chr1:12492824-12494882 | Esophagus | SE_29231 | chr1:12492824-12495344 | Fetal_Intestine_Large | SE_29871 | chr1:12492943-12496653 | Fetal_Muscle | SE_33776 | chr1:12492745-12496835 | HCC1954 | SE_37319 | chr1:12492732-12495649 | HSMMtube | SE_39882 | chr1:12492813-12499393 | K562 | SE_41209 | chr1:12492560-12495038 | Left_Ventricle | SE_42647 | chr1:12492609-12494807 | Lung | SE_45864 | chr1:12493103-12496844 | Osteoblasts | SE_49026 | chr1:12492458-12494788 | Right_Atrium | SE_50544 | chr1:12492877-12494722 | Sigmoid_Colon | SE_51539 | chr1:12492828-12494951 | Skeletal_Muscle | SE_52815 | chr1:12492745-12494814 | Small_Intestine | SE_54847 | chr1:12492782-12495035 | Stomach_Smooth_Muscle |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I012432 | chr1 | 12492844 | 12500570 |
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Enhancer Sequence | AAACAGTAGA CCAAATGGTG ACTGAGTCCC AACCCTTCTT CAGGCCAGAT GAAATCATGG 60 TCCCTGCTGG CGCCATTCCT CCATCTCAGA GCCCTCACTT GGGTTCAGAC CCTCAGTCAC 120 ACAGGGAGCC CCGCCACAGC TGAAGTGTTT TGTCAGAGCA AGATTGCAAA GAGTTAACAC 180 TTTTGCTTTT TCGGAAAGTT ATCTGTGAAG AGTATTAGTT GTTTAATAAA GCGTGCCTGC 240 CCTCCCGATG AACCCGCCAG TGACTCTGCA GCTGGGGTCA TTCCAAGTTC ACGCAGTGGA 300 CTTTTGACTG CCTTCTGTGT CTGTGAAAAC AGTCGGCAGC TCCTGCGGGG ATCATTCATT 360 CAGGCCTGTA ACACAAAACT ATTGCCAATG GGCACCTGCT GGGGCAGCTT CCCGGGAGGG 420 CTGGGAGGAA GATACCAAAC TCATCAGGCA TCTGTGGAGA TAAGAGCGGC AGGGGATCCA 480 CTGGGATCCC GCTAATCAGG CCTGCACTTA GACCCCACTG CCTGGCCAAC AGGCTGGTGT 540 CAGAATGTAT TAGGCAGCCC TGGCCAGGAT AGGATGTGAG CTAATTAAAG GCCTTTTACA 600 AAGAGGAGGA GGTAGGGGGT GGGGAGAGAG AGAGAGTGAG AGAGAGAGAG AGAGAGTGTG 660 TGTGTGTGTG TGTGTGGAGG AGGAGGAGGA GGAAAGAAGT TTGAAGTGCA TTCCCCAAAT 720 TTCCAGCACA TTCTTTATTC CTCTGTTTTA TCCCTCAAAA CAGAAGAAAA CAAATTAGAG 780 GCTGAGCATT TGGTTATTTC TAACCTGAAA TTGTCATTCA TTGTGCCTGA TGCCGTATTG 840 GTTTTAACTG CTATTTTTGT GGAATTACAT ATACTGTGAA AGACATCTTT TGCCGCAGTC 900 TCCCTGGGAA CATCCTGTTG TTGAAATGCC GTTGGTCAGC TGCTTGAATT TTGCCCTTTT 960 CTCTGACTTT GACACATCAA GGCAAAAATA GGTACCTATT TGTGGTGTGT TCTAGGTTTC 1020 TCCCTTTTGC TTGGAAAATC CACTTGCCAG CTGTGAAGGG TGCTGCTGGG AGGATGAAAT 1080 GAGTCAGTGC ACAGCGTGTG CTCTTAAAGT TTGGTGGTTG AGGTGGCGGT GGTAGCAGCT 1140 TGGCTCTGTG GTTTAAAATG CCACAGCATG CACTATCTTG AAAATACTCA GTAGTCCTAG 1200 CATACAACTG GGTTTTAGTT ACACCTACTT AAGGAAGAAA GCTCATTTGA AAGTGTTTGA 1260 TTTTCCTGTA CTTTCGTTTG TTTATTTAGC CTGTGTATTC CCCCCACCCC CAGTAAGCAG 1320 CAAACTAACT TATTTATAGG CCTCAGGTAT GTTTAAATCT GTGGTATTTT CTTAATCAGC 1380 CTGATAATGA TACATTTTTG AAAGCAGTTT TGTTCACACA TAAACCTAAG CCTTTATTAT 1440 ATTATTCTGA TACATTCCAC ATAAGCTTGT CTGTGCACAA AGAAACATTT AGATTAATCT 1500 TGTACTACAT GGTAACAATC CTAGGAAATT CCAATCAAAA GCCAACAACC TGTTTCCTTC 1560 ATTCTGGACT GTTGGTGGGT TTGTTTTTGT CTGTGGTCTG ATAAGGAGTA ACAACAATGT 1620 TAATTTTGTA TTTCCTTGGC ATTTGTCTCA CATAATCTTT TGTCAAAGTT GACCAGTAGG 1680 CTTGTCAGGC TTGCCATGCA GTTTATGAAA TAAATAGTTA CAATGGAGTA GTTAACTTAG 1740 CCCTGCGGAA TATGTTAGTG TATCCTTACC GTAAGTGTTT AAAATGTTAA TTACATTTAT 1800 CTTTATTTCT CAGCATTGCT ATACAGAAAA CATGGGATAG ACACTGATAC TGATTGCCCA 1860 GTTGAAATAA GTTTTGAATT 1880
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