EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

DR013-01308

Organism

Danio rerio

Tissue/cell

Intestine

Coordinate

chr1:44002303-44004085

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arid3b	MA0601.1	chr1:44003402-44003413	CTAATTAATAT	-	6.02
FOXA1	MA0148.4	chr1:44003041-44003057	GTATATTTACATAAGC	-	6.11
FOXB1	MA0845.1	chr1:44003043-44003054	ATATTTACATA	-	6.62
FOXC1	MA0032.2	chr1:44003043-44003054	ATATTTACATA	-	6.62
PBX3	MA1114.1	chr1:44003176-44003193	CCATCTGTCACTCAAAA	-	6.29
ZNF24	MA1124.1	chr1:44003710-44003723	TATTCATTCATTC	+	7.52

Enhancer Sequence

ATCCTGCAGG CACAGGGGTC GATATTTCCC CATTTACCGT ATTATCAAAC ACAGCGTGAT 60
GCCGACCACA ACCTTACTCA CCAGTTTAAC TGTAAGTCAG TCCTCCTGTC AACCAATAAC 120
GTCCGTTATA CTGTTAACTA TTCCACTAAA CCGCGACAAG AGAGAATAAC CCGGTTATAA 180
CCCAATGCGG TGTGGTATTG TGGATCGATC TGTTGTTGAA ATCCAATAGG AGAGAAAGAG 240
AGAGAGAGGG GCAGAGAGTG ATCGCACTGC AGCGCTGCTC AAGGCGAATG ATGATGATTT 300
TCTGCTATGC GTTTTCCTTC TGATTTCAGC ATGATCCGGG AAATTATTCA AACAAACATC 360
CACTGGAAGG TGAATGATTT ACGTCTTCAG GGAATGTTCG ACGCTGTCAA GTCTTTCTGA 420
ATGCGCCGGT AGTATTCAAA ACGGTAAAGT CGATGCTGTA ATCCGCCGCT ACCTCCTATC 480
TACATAACCG TCGCTTTATT TAATACTAGG TCACTGAGCG ACATTATTAC CGTAGGTGCT 540
TCAGGGATCG ATGGACGGCG CTGCAGCCAA TCAGCACTCA AGACTTCATC ACGACGCACA 600
AAACGGACGA ATCATCGTTG TTCTTTTACT GATAATCCCG CCTACTCGGT CTTGCTGCAG 660
GAGGGCGGGG CTTCAACACG CACTGAGGTT TTCCATTTAA CCAGTGACCG TTGCGTGCGA 720
CAGTGTACGC CGTAACATGT ATATTTACAT AAGCCACTCT GGGCGCGTAT ATGGTAAGTG 780
ACGCAGATGT AAACCAATAA GAAACCGTTT TTCTTCGTAG GGAGGCGGGA CAACTTCGCT 840
CGGGTCAATA ATCCAGCCCC TCCCCCCGCG CGTCCATCTG TCACTCAAAA AAAGGTACAT 900
TGTGGCTGCG TTGGTGACGC GCTAGTGTAT AGTGAGGTCA TGAGTGTACC AGGTCGAGGT 960
GATTATCGTG TAGATTTTGC CTAAATTCAT TAACTATATA GATTTAAAAG CGATATTTGG 1020
AGGATATCAA AGACAACATT TGAGGCTGAT GGATGGAGAG GGATCTGACC TATTTCAATT 1080
GTGCCATAAT TATCTGCCCC TAATTAATAT CACTCTCTAG AGGAAAATGC TGTAATTCTT 1140
TGAATGGATA TCTTTTAGAT ATAAATGATA TGTCTGACCA TAACAGGTTA CTACAAGTTA 1200
ATAAACTATT ATACTATTAA AACACTTGAT TTATAAATTT TGAACAAAGA AATTTGTACT 1260
GTGGGAAAAA CACTAACGAT TATTTTAAAA AACTTTTTGG AAAATATTTA ATCAGAATAT 1320
TTACTTTTTT CTCCACTCCT TGCACAGTAT TTAGCATTTA CTGACTAAAT ACATCAAACC 1380
TTTTTACACA ACCAAGCATT TAATATTTAT TCATTCATTC TTTTCAGCTT AGTCCCTTTA 1440
TTTATATGGG ATAGCCACAG CGGAATGAAC CGCCGACTTA TCCAGCAACT CATCCAGCCG 1500
CAACCCATCA CTAGGAAACA TCCACACACA CACTCATTCA CACACACTCA TACACTACGA 1560
ACAATTTAGC CTTCCCAATT CTTACACCAC GTTTTTGGAC TTGTGGGGGA AACCAGATAC 1620
CCGGAGGAAA TCCACACGAA CACGGGGAGA ACATGCAAAC TCCACACAGA AACGCCAACT 1680
GACCCAGCCA AGGCTCAAAC CAGCGACCTT CTTGCTGCAC CAAAACAAGT GTATGAATGT 1740
AAAAAAATAT ATTTAAAATG TCTAGTATAC ACATTTTCAT CA 1782