EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

DR013-00574

Organism

Danio rerio

Tissue/cell

Intestine

Coordinate

chr1:19243260-19244822

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr1:19243390-19243404	GGCCACGCCCCCAA	+	6.3
KLF16	MA0741.1	chr1:19243391-19243402	GCCACGCCCCC	+	6.62
RUNX1	MA0002.2	chr1:19243985-19243996	AAACCACAGAG	-	6.14
SP1	MA0079.4	chr1:19243388-19243403	CAGGCCACGCCCCCA	+	7.24
SP3	MA0746.2	chr1:19243390-19243403	GGCCACGCCCCCA	+	6.57
SP4	MA0685.1	chr1:19243388-19243405	CAGGCCACGCCCCCAAA	+	6.95
SP8	MA0747.1	chr1:19243391-19243403	GCCACGCCCCCA	+	6.11

Enhancer Sequence

CACCACACAA CTCATCCCCT TCCGTGGATG CAGCCAATCG CAACGGGCCC TCTGCAACTC 60
CGCCCACTTC CCTCAGTTTG CGTTCCTCAC ACAATCAGTT GCTCAGTGGT GATGTTATCA 120
AACAGGGCCA GGCCACGCCC CCAAAGTGCC GGAAGAAGTA TGCTCTAACA AGTATTCAGA 180
GTGCAATGGG TCTCGGCGAA GGTGTGATGC CACCATCATC TTCATCAGCA ACTACTGCCA 240
ACCCTAAACT GGCCAAAAAC GGTGCAAATC AGTTACGCAA AGCTGCCGAG AGACAGGACC 300
ACAACAAAAA CACTACTGAA GAAGAGGAAG AAGATGAAGA TGGAAACACA GCAGCCCAAT 360
CAGAGCTCAG CATCGACGAT GAGTTGAGGA ATATTGAGGA ATTAAGTCTG GACAGCGAGT 420
CTAATGTTGA CGACGTTCAC AGTGACTTTG ACGCCAACAA CGAGCTTGTC GATGAAGAAG 480
TAAACGAGTT AATTGAAGAT GACACTAATG AGGAGGATCA CGTTGAGAAT TGTGATGACC 540
TGCTCATTCT ATCTGAGAAA AGCGAAATCG TTTCAGACAA GAAGTCCCCT GATCACCTTA 600
AGACCAAGAG TTATCTGGAG TCATGCCTGG ATGGTCTGTC ATACCAGCTG CCTGATTCGC 660
AAGACGACGA CATCACTAAG CCTTTGCTGG AGAACAAGAA GGATCCCTGT CCCGCATCTC 720
CAAGAAAACC ACAGAGCCCC GAGGACACAC CCCTGCTGTC TGTCGGCTCT TCATCTTCCT 780
CTTCCTCGCC AGAGACAAAA AAAGACAGAC CACGCACAGG AGCCAAGACA GACAGGGCAC 840
TAAACCGCAT CCAGAACCTT CCACACAGCG ATGAGGAGTC TAGCTGGACC ACACTGTCAC 900
AGGACAGCGC TTCGCTGGGC TCACCTGAAG AGAACGGTCA GTAGCACACA CGTTCACATA 960
TGCGTATGTG TGTTTATAGC TTGCTGGTTT TCTCAGTGTG GTTTTGTGTG TGTGTGTGCT 1020
TTGGCTCAGT CTCATGGATG TGTGGCACTC ATGTGGTATG TGTGGTTTGC AGTTTGACTG 1080
AAGTGCGTTG GCAGAGAGGT TTTTGTGTGT TTGGACTTTA CACTTCACTG AAGTGTGATC 1140
TAGGTGAACG CAGCACAGTG TGGGTCGGGT TTGAAGCTGT GAAGGAAAAC TTGTCAAAAG 1200
TGGTTTTCTT ATTGCGTGTG TGGTGCTGTG TAGTTTACTT TAAATTATCT GTTGAAGAGG 1260
TAAATTGCCC ATTTTAATAG CTGTAATTGA TGCTTATAAT CTGAATCAAG AATGTTAAAT 1320
AAGGTAGAGA CATACAAAGG TGTTCATAGC AGTTGGTCAC CAGCACTGGA GTTTACAGTC 1380
TGCTGTTGAG TGGTCTCAGT ACCCCTCATT TAAAGAGTTG CTTCACCCAA AAAATGTAAA 1440
CCTTGTAAGT TGTTCCAAAC TTGTAATACT ATTGAGTAAA AGTATAATAC AATATTCTTT 1500
GTGAAGTTTA TTTATAAACT AATTTCGAGA GGATCACATG CTTATGATTG ATATTCAATT 1560
TA 1562