EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

DR011-48407

Organism

Danio rerio

Tissue/cell

Embryo_epiboly_80

Coordinate

chr9:39217023-39217728

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DMRTC2	MA1479.1	chr9:39217438-39217450	AATTGATACACT	+	6.02
HNF1A	MA0046.2	chr9:39217666-39217681	GGTTAATCATTTATT	-	6.9
HNF1B	MA0153.2	chr9:39217667-39217680	GTTAATCATTTAT	+	6.27
NFYA	MA0060.3	chr9:39217319-39217330	GACCAATCAGA	+	6.14
NFYB	MA0502.1	chr9:39217314-39217329	ACACCGACCAATCAG	+	7.03

Enhancer Sequence

GTCGAAATAG GACAAATTAG CTTGTGTAGG GGATAGATTC TGGACCTTTG TAAGTGAACC 60
CCCTCTGGCT ACGAGCCTAG CAATTGATTT TATTAATCAG CATCATCAGT GCTATATAGT 120
TAAATTTAAA ATCCTCTAAT AAAACATTAG CTTAGCCTAC ATTAGTTGTT TTAGCATCAT 180
TAGAAGATTC ATATTTCTAA TTCGCTGTTT TACAAAGAGG CACAAACATG ATTTGCAGAT 240
TTGAAACACT GATAATAATA CTGTTGTGGA AGATCTTTAG CCATCGACGT CACACCGACC 300
AATCAGAGCA CAGCTCGCTG AGTAAGCGCT GAGCGTGTCA GGAGCTCTTT CTGTCAACAG 360
ATACTCAGTC AAACTTTACC CACGGCGTCA GCAGGTAAAT AGCGGTGCGT GAAAAAATTG 420
ATACACTCTC TAAATTTGCA TCTACATCTA GTCTCACATA TTTTAAGGAG GATATAACAG 480
TTCTGAAAAG AATATGTCAA AAATATTAAC AATATGTGGA GTTGCCAAAT CACTGAGGCT 540
GGGATGGAGA AGCTGGAGAT CATCGACGCG GCTGCTCAGC TTGAAGGTGT GTGTGTTATT 600
TGGTTAAACG GTTTATTTTG CAGATTCAAG GTAAGAAAAA TAAGGTTAAT CATTTATTTA 660
TGTCAAATGA CAATCAAATA TTCTGGAAGT TGTATTTCAA CTTGC 705