EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
DR011-35852 
Organism
Danio rerio 
Tissue/cell
Embryo_epiboly_80 
Coordinate
chr4:39200684-39201276 
TF binding sites/motifs
Number: 16             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
CDX2MA0465.1chr4:39201077-39201088AAGCAATAAAA+6.32
DUX4MA0468.1chr4:39201181-39201192TGATTGGATTA-6.02
EOMESMA0800.1chr4:39201116-39201129CTTTTCACACCTC-6.5
HNF4GMA0484.1chr4:39201039-39201054TCAGTTCAAAGTTCA+6.23
Hnf4aMA0114.3chr4:39201040-39201056CAGTTCAAAGTTCAAA+6.11
NFYBMA0502.1chr4:39201157-39201172CTGATTGGTCGGTTT-7.73
RXRGMA0856.1chr4:39201040-39201054CAGTTCAAAGTTCA+6.32
RxraMA0512.2chr4:39201040-39201054CAGTTCAAAGTTCA+6.11
SOX21MA0866.1chr4:39201000-39201015GACAATTTCAGTGTT+6.71
Sox11MA0869.1chr4:39201000-39201015GACAATTTCAGTGTT+7.35
Sox1MA0870.1chr4:39201000-39201015GACAATTTCAGTGTT+6.42
TBR1MA0802.1chr4:39201118-39201128TTTCACACCT-6.02
TBX2MA0688.1chr4:39201118-39201129TTTCACACCTC-6.14
ZIC1MA0696.1chr4:39201132-39201146CACAGTGGGGGGTA-6.43
ZIC3MA0697.1chr4:39201131-39201146GCACAGTGGGGGGTA-6.55
ZIC4MA0751.1chr4:39201131-39201146GCACAGTGGGGGGTA-6.57
Enhancer Sequence
GAGGTGTGCT GAAATGCACA TGTGGTTTTC ACACTCAAAA GGTACATTTT TGAGTCAATA 60
TGTGTTTATT TTTATTTACT AGAATGCCTT TCCTTTTTCA TGATTATATG TATTTTTGTG 120
ATTTATTTTC AGCAGAGTAC TGCTTCTGCT GCTCCAGCAC AAACGGTGCA ACAACCTGCC 180
CCTACTGTAC CTGCTCAGGA GGTGATGGAG ACGAGACAAC TTGAGGCCCA GCCCCAGCCC 240
CCGTCTACTC CATCAGTGGC ATCAAAGATT TCACCGCAAT TGTCAATGGT ACATTTTTTT 300
AAAAATCAAA AGAAAAGACA ATTTCAGTGT TTCAAGTGTT CAAGGTGCTC AAAGTTCAGT 360
TCAAAGTTCA AACATAGGAG AGAAAAGAAC AAAAAGCAAT AAAAAAGTTG AGGTGTTGCT 420
AGAGACATGC TTCTTTTCAC ACCTCTTGCA CAGTGGGGGG TAGCAGACAC TTGCTGATTG 480
GTCGGTTTGA GTTTCTGTGA TTGGATTAAA TTACATGGTC AGGTCATGGT CAGGGTCACA 540
GTTTTTAAAG CTACATTTTA ACCTCTTGTC TTCAGATAAT GATACATAAT AA 592