EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
DR011-35690 
Organism
Danio rerio 
Tissue/cell
Embryo_epiboly_80 
Coordinate
chr4:35067758-35068362 
TF binding sites/motifs
Number: 16             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
CDX2MA0465.1chr4:35068165-35068176AAGCAATAAAA+6.32
DUX4MA0468.1chr4:35068269-35068280TGATTGGATTA-6.02
EOMESMA0800.1chr4:35068204-35068217CTTTTCACACCTC-6.5
HNF4GMA0484.1chr4:35068127-35068142TCAGTTCAAAGTTCA+6.23
Hnf4aMA0114.3chr4:35068128-35068144CAGTTCAAAGTTCAAA+6.11
NFYBMA0502.1chr4:35068245-35068260CTGATTGGTCGGTTT-7.73
RXRGMA0856.1chr4:35068128-35068142CAGTTCAAAGTTCA+6.32
RxraMA0512.2chr4:35068128-35068142CAGTTCAAAGTTCA+6.11
SOX21MA0866.1chr4:35068088-35068103GACAATTTCAGTGTT+6.71
Sox11MA0869.1chr4:35068088-35068103GACAATTTCAGTGTT+7.35
Sox1MA0870.1chr4:35068088-35068103GACAATTTCAGTGTT+6.42
TBR1MA0802.1chr4:35068206-35068216TTTCACACCT-6.02
TBX2MA0688.1chr4:35068206-35068217TTTCACACCTC-6.14
ZIC1MA0696.1chr4:35068220-35068234CACAGTGGGGGGTA-6.43
ZIC3MA0697.1chr4:35068219-35068234GCACAGTGGGGGGTA-6.55
ZIC4MA0751.1chr4:35068219-35068234GCACAGTGGGGGGTA-6.57
Enhancer Sequence
GCAATCTCGT GGGCAGAGGA CTTTGCTTGG AGGTGTGCTA AAATGCACAT GTGGTTTTCA 60
CATTTTTGAA TCAATACATG TTTATTTTTA TTTACTAGAA TGTCTTTCCT TTTTTATGAT 120
TATATGTATT TTTGTGATTA TTTTCAGCAT AGTACTGCTT CTGCTGCTCC AGCACAAACG 180
GTGCAACAAC CTGCCCCTAC TGTACCTGCT CAGGAGGTGA TGGAGACGAG ACAACTTGAG 240
GCCCAGCCCC AGCCCCCGTC TACTCCATCA GTGGCATCAA AGATTTCACC GCAATTGTCA 300
ATGGTACATT TTTTTTAAAT CAAAAGAAAT GACAATTTCA GTGTTTCAAG AGTTCAAGGT 360
GTTCAAAGTT CAGTTCAAAG TTCAAACATA GGAGAGAAAA GAACAAAAAG CAATAAAAAA 420
GTTGAGGTGT TGCTAGAGAC CTGCTTCTTT TCACACCTCT TGCACAGTGG GGGGTAGCAG 480
ACACTTGCTG ATTGGTCGGT TTGAGTTTCT GTGATTGGAT TAAATTACAT GGTCAGGTCA 540
TGGTCAGGGT CACAGTTTTT AAAGCTACAT TTTAACATCT TGTCTTCAGA TAATGATACA 600
TAAT 604