EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
DR011-32640 
Organism
Danio rerio 
Tissue/cell
Embryo_epiboly_80 
Coordinate
chr3:23416416-23418730 
TF binding sites/motifs
Number: 13             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
E2F4MA0470.2chr3:23417179-23417193AAATGGCGCCCAAA-6.6
HNF4A(var.2)MA1494.1chr3:23416505-23416520AACTCCAAAGGTCAA+6.09
HOXA10MA0899.1chr3:23418163-23418174GGTAATAAAAA+6.62
NFYAMA0060.3chr3:23417639-23417650TCTGATTGGTC-6.14
NFYBMA0502.1chr3:23417640-23417655CTGATTGGTCAGTGG-6.15
NFYBMA0502.1chr3:23417190-23417205AAAAGGGCCAATCAG+6.34
NR2C2MA0504.1chr3:23418249-23418264AAGGGTCAAAGGTGA+6.26
Nr2f6MA0677.1chr3:23418250-23418264AGGGTCAAAGGTGA+6.35
RXRBMA0855.1chr3:23418250-23418264AGGGTCAAAGGTGA+6.75
RXRGMA0856.1chr3:23418250-23418264AGGGTCAAAGGTGA+6.57
RxraMA0512.2chr3:23418250-23418264AGGGTCAAAGGTGA+6.47
ZNF263MA0528.1chr3:23416638-23416659AGAGGAGAAAGAGAGAGAGAG+6.41
ZNF410MA0752.1chr3:23418046-23418063GCATTTTATGGGATGGC-6.55
Enhancer Sequence
AACAAATATA AAAGTTAAAA AATGTGTTGA TTCAAGAATC ACTCATGGTA CATCTAGCAA 60
GACATGCTTT AGATTCATAA AATGCCATCA ACTCCAAAGG TCAATGAAAG TATCTCAGTG 120
ATCTGGAATC ACACATTATT TATAGTCACA GACATTAAAA CAGCAAAGAT GCTTGGAAGC 180
ATCCGTCCTG CTCATGGTTT GTGGAAGTGA AGCGGAGCGG GTAGAGGAGA AAGAGAGAGA 240
GAGAGACGAG ACGAGACTGA ATGGGTATAT TGAAACTAAA CACTGATGTA GTTTAATGCC 300
AGCTGCCCCG GAAGCTTCCA AAACCATTGG TCGGGAAAGA GCGAGAGTGA GAGATAGAAA 360
GACAGAGAGC AAGAGAGAGA GTGCTAGTAA CTACACCAAT AAAATGAGAT AAATAAAAAG 420
AAGCCAAGGC ATAAAGACAA TTGAGAGTAT CATCTATAAA GTCAAATGAA GAACTGCAGC 480
ATAGTATCGG ACCATTACCA TAACAATGAG GAGACAAATA ACACAAACAT TTAAGCCCTC 540
TGGAACCTCT AGAGGGCATA GCATCAAACT TCTAATGCAA TGCATGTGTT TAGGATCAAG 600
GAGGGAAATG GGTGCCAGGG GTCATGTGGG AGGAGCTTGA AACCCTGCTC TGGTGACTGA 660
GACCACAAAC CCTAAAGACC TCTGAACTCC GGAAGGTTGA CGCCCACTGG CTGACGAGCA 720
GAGAAAATGG CGCCATTTGA CCGCCTTCTA CCTCGCTTCA TGCAAATGGC GCCCAAAAGG 780
GCCAATCAGG GAACAAAGAA TCCAGCAAAG GGTGTTTCAC GCCACACAGA TCAGCAATGC 840
AAGCAAGGCC AGGCCAAATG AAACCAACTG AAATCATACA TTGTCCAACG TTCTAGATGG 900
CCATGCTGAT TTGAAGGCCA CTTGCAACTT GTTTTCAAGC AAGTCTCGAG TTTCATGCCT 960
CGGGCAGAAA AGCACCGAAA GGTACAACAA AAGGCAAAGG CCACACAAAC ACCAGCAATC 1020
TGTTCGCTCT CCCACTGATC AATCACCTCG TTCCCGAACC CTTCCCCCAA GCAGACGCTT 1080
CCGCATCCCA CCCACCCACA CTCACCACAC ACCCACAAAC AGTTTTTCAA ACCAACCCCC 1140
ACTACAGAAA AACATCCCTC TTGTTTGGCA CCTTTGAACC CATTTAAAAC CATCATGTCA 1200
CGTCCTACCA AGTCTCCGAC CAATCTGATT GGTCAGTGGC TTAGTTATCA CAGCCACATG 1260
AAAAGTTGGG AGGACTGACA CCCCTTTCTG TCTTTTTCAA TTGTTTACGG CCGAGAACAG 1320
ACTTGAGCAA ATAAAAGGTC AAAATATGGG TGTAATAATG TCCTATATTT AGCTAAATAA 1380
AAGAAAAAGA CACTTTTTTT CTGATGTTTC AAGGTAAATA TAAGAACATG TGAACACACT 1440
GAACTTACTT TAAATGATTC AAAACATCTT GCAACTGATG AAAACAAACT AAAACGCAGC 1500
ATTTTAAATT TAACCTGTTG TCCACCGGTC CAGAGCCATG GAGCAATGGA TGATGGGACA 1560
TCCATGATGT GAACCACAAA ATCTGTTAAC ACACTCATAT ACTCCAAAAC GAGTTGCATG 1620
GGATTTCTCT GCATTTTATG GGATGGCAAA TAAAATTCTA TGTTTAGATT TGGCTTCAGA 1680
TTAAACGGGA ATCTCACACT GAACACACAG AGAAGTTCAA TCATACAGCA CTACAGACAA 1740
TTAAAATGGT AATAAAAAAG CCAAATAACA AGAACAGAAA TGGACAACAG CAGAAAAGAA 1800
CGAAACAAAA AAAAGAAGAG ATTCACTCCA TATAAGGGTC AAAGGTGAGG GCTCTATAGG 1860
CAAGTGAATG GCATTAGGGG GAGGGTGTGT GTTTGTGTGT ATGTGGGTAC TAGGGTGAGG 1920
GTTGGTATGT GGTATTGTCC CATAAGAGCA GGTCAGCGGC ATGTTACTGA AGTCCACTTC 1980
TATCTTGAAC TTGTGAACAT GAAAGAAAGT ATAGATGGGA CTATATGGTT TGAGATAAGA 2040
TTGAACTGTT CAGTGCTTTT ATTCAATAAA TCAGCATTTA TTAGTAAAAT CACACAAAAC 2100
AATCCATAAA TCTCACTGAA AATTGTACTA GCCGAGGCAT TTTGCAAAAC TGCTCACTCC 2160
ACACTGAGGC ATGACGAGGA AAAAAAAGCA CACATTAAAT GGAAAGAACT ATATGTCTTG 2220
ACACAGTTAA GTACATTCAG TTCCTCCACA CACACACACA CACACAACAC GCAAACATGC 2280
TTAAACACAC AGAAACATTT ACATCGCCAG TTAC 2314