EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
DR011-31941 
Organism
Danio rerio 
Tissue/cell
Embryo_epiboly_80 
Coordinate
chr3:1420807-1421933 
TF binding sites/motifs
Number: 15             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
BHLHE41MA0636.1chr3:1421628-1421638GTCACGTGAC+6.02
BHLHE41MA0636.1chr3:1421628-1421638GTCACGTGAC-6.02
PBX2MA1113.1chr3:1421049-1421061CTGATTGACAGG+6.62
PBX3MA1114.1chr3:1421047-1421064CGCTGATTGACAGGTGA+6.07
RFX1MA0509.2chr3:1421880-1421896AGTTACCATAGCAACT+6.3
RFX1MA0509.2chr3:1421880-1421896AGTTACCATAGCAACT-6.3
RFX2MA0600.2chr3:1421880-1421896AGTTACCATAGCAACT+6.61
RFX2MA0600.2chr3:1421880-1421896AGTTACCATAGCAACT-6.66
RFX3MA0798.1chr3:1421880-1421896AGTTACCATAGCAACT-6.25
RFX3MA0798.1chr3:1421880-1421896AGTTACCATAGCAACT+6.26
RFX4MA0799.1chr3:1421880-1421896AGTTACCATAGCAACT+6.23
RFX4MA0799.1chr3:1421880-1421896AGTTACCATAGCAACT-6.64
RFX5MA0510.2chr3:1421880-1421896AGTTACCATAGCAACT+6.88
RFX5MA0510.2chr3:1421880-1421896AGTTACCATAGCAACT-6.94
USF1MA0093.2chr3:1421627-1421638GGTCACGTGAC-6.14
Enhancer Sequence
TCATCGAAGA ACTGATTCAG TCCGAAATGA TCGTTGATTT TTAAATTAGG CGCGAAGAGA 60
AGCGCGGGAA AGAAAAATAC ACCAACAGAT CTGATCTGTA CACTTTCACC ATCTATACCT 120
CTCATTTTCA GCATTATTAT GGGTTATTAG TGTGAGCCTG TCGTTAGTCT GATCTACACG 180
ACATCAATAA TAAACATCAT ATGGTAGACC GTGACACACA CACACACACA CAGGCACGAA 240
CGCTGATTGA CAGGTGAAGT GTGTTCACTG ACACCCCCCC ACACACACAC AGCTGTCAGA 300
TTATCCGCAT TTCCACATTC ATTCGCTCTA TATTCATCTA TTTTATTTAA TAATCACTGA 360
TTCTATAATC AATACATGTT TGTAATTCTG TATGACCTGA TCAGTGTGTG TGTGTGTGGC 420
TGATCGTGTT ACTCACGCAC TTTCTTCGGT TTGGCCAGAA TGGCGCCGGT GGCTGTGTTC 480
ACTGCGGTCC GGTGTTGCAG CTGCTGAAGC CCGAGCTGAG GAGAACACAC CGACCGGCAC 540
ACGAACCGAC GGACAACCGA CACCGCCGCC ATGACCGACG GAGAGAGCGA TATAGAGGTG 600
TGTGTGTGAC AGAGAGACAG AGAGCGAGGT GTGTGTGCGC GCGGAGAGAG AGAGAGAGCT 660
CCACACACTG ACAGATGATA CCGGCGCGTG TGTGAGAGAG AAAGTGTGAC TGAATGTACA 720
CTACTATAAA CAGTGTTGTA TTTTACTGTA TATTCTCCCG ACTGTAGAGT TCATATCTCA 780
GAATAATCAG AACACGACAT GTTGGGTGAT GTAGGTTAAC GGTCACGTGA CAGAAAGCGC 840
GCATTTCCTC TTTAATTGAG GTTTATTTTG CTGGCTGTGC TCTCAAAATG GCTTTATTAA 900
TGTTTCATTT TCATTTAGTA GTAAATCACT CACTGTAGTC ATGATCGCGA CCGCTTCTGC 960
TCTTTATAGT ATAGCATGTG AACGATATAT CAAACTAGTA TTAACTATAG CGATACCTGT 1020
AATACTGTAG GATATTTTAG TTTGTTGCTA CAGTAAGCTG TCATGTGTTG TAAAGTTACC 1080
ATAGCAACTA CAATCAACAC AGCTGATCAA TTAATAGTGT TGTTAC 1126