EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
DR011-13853 
Organism
Danio rerio 
Tissue/cell
Embryo_epiboly_80 
Coordinate
chr16:40396146-40396849 
TF binding sites/motifs
Number: 14             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EHFMA0598.2chr16:40396454-40396466AACCCGGAAGTC+6.14
ELF1MA0473.2chr16:40396454-40396466AACCCGGAAGTC+6.74
ELF2MA1483.1chr16:40396454-40396466AACCCGGAAGTC+6.52
ELF4MA0641.1chr16:40396454-40396466AACCCGGAAGTC+6.18
RFX1MA0509.2chr16:40396584-40396600CGTTTCCATGGTAACG-7.52
RFX1MA0509.2chr16:40396584-40396600CGTTTCCATGGTAACG+7.53
RFX2MA0600.2chr16:40396584-40396600CGTTTCCATGGTAACG+7.63
RFX2MA0600.2chr16:40396584-40396600CGTTTCCATGGTAACG-7.66
RFX3MA0798.1chr16:40396584-40396600CGTTTCCATGGTAACG+7.64
RFX3MA0798.1chr16:40396584-40396600CGTTTCCATGGTAACG-7.81
RFX4MA0799.1chr16:40396584-40396600CGTTTCCATGGTAACG-7.36
RFX4MA0799.1chr16:40396584-40396600CGTTTCCATGGTAACG+7.74
RFX5MA0510.2chr16:40396584-40396600CGTTTCCATGGTAACG-7.37
RFX5MA0510.2chr16:40396584-40396600CGTTTCCATGGTAACG+7.41
Enhancer Sequence
TCTTTTGTGT CATTGTTTTA AATGAACAAA ACGTGCGTTT TCATAACTTA ACGTTAAGTT 60
AACGTTAGAC GTTATAAAAA TCAGAAGTTA TAAGAGAAAA TGCGCCTGAA TTGCAATCTA 120
TATGCCTCGG TCGCCTTATC CTCAGACGCT ATGTTGGTGT TTAAAAACTG TAGACGGTCT 180
GTGTAAATCA TCAGTTGTCG TGGCCGAGTG GTTAAGGCGA TGGACTAGAA ATCCATTGGG 240
GTCTCCCCGC GCAGGTTCGA ATCCTGCCGA CAACGAATCG TTTTCCTTCT AGAACTTACA 300
CCCACAACAA CCCGGAAGTC TCGTGTCCTT TGAGAGAACA CGATTATGTG TTTACCGGGA 360
CACTATTTTG AATTCTGATC GAGTATGTCA TTAATTTTAT GATGCCTTTC TGAACCGATA 420
ACAAAAATAA AATCCACACG TTTCCATGGT AACGGACGTG GCGTTCTCCA TCGGACAATC 480
ATGGCGGATG ATTTGGACGA TTTACTTGAT GAAGTCGAAT CAAAGTTTTG TTGCAACACT 540
TCGGAGTCTA AACAGACAAG CCGTGTTATG AAACATACGG ATCAAAAGTG TGACAATCTC 600
GAAGAAAGGA AACTGCCAAG GTAGTAGGCT AGCAAGATTA GCAACCAGAG CTAACGTGGC 660
TAATTATGTC AGACTAACGT TAGTGCAATA AAGAAGCACG TTT 703