EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

DR011-01672

Organism

Danio rerio

Tissue/cell

Embryo_epiboly_80

Coordinate

chr1:50437802-50439375

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr1:50439278-50439297	AGACCAGTAGAGGGAGCTA	+	6.4
NFIC	MA0161.2	chr1:50437867-50437878	TTCTTGGCAGA	+	6.02
SP2	MA0516.2	chr1:50439232-50439249	AAGGAGGCGGGATTTAG	-	6.04
SPI1	MA0080.4	chr1:50437977-50437991	GAAAAGAGGAAGTT	+	7.14
SPIC	MA0687.1	chr1:50437977-50437991	GAAAAGAGGAAGTT	+	6.31

Enhancer Sequence

TATATAACTG TGAAATATAT AATGCACAGA ACACAGTCAG GTGCTAATGT ACTGCAGGTG 60
CTTTGTTCTT GGCAGAGTTC AACAGTTTTG TCGAGGTAAG AACAAACGCA AGCTTCAATC 120
TATTGGTTTT ACACATTCTC GGTCTTTTTC CTGACGGTAA CATCTGATAT TCACTGAAAA 180
GAGGAAGTTT GGAATCAGCA CTAATATTTA TTGTTCTTCT CATGACCGCC TGTTCATATA 240
GAGTCTGTAT GGGCTCGTGT TGTTTAATTT CTATGATTTT CATGGCTGTT TTTTGAAAAT 300
GAACCAATTT ATTTTTCAAT TGAATCGCCA GATTTCCAAA CCAGACTGTG ATTCCAAAGC 360
AAATACGACT TTCAAGCTCG GTAAAAAACA ACAAGCAAAA ATTGCTACCC ACTCCATACC 420
ATCTCAGCCT TCTTAAAAAA AAATAAAGCA TCTGTTGTAG TTGTGAGCAC AAACTTTTTA 480
AGATATGCTG AAGATTGTAA TATTTTTCAT GATATGTCAG AAGTGTCTTT TCTACATGTG 540
ACATAACATT ATCCAATTTA GATGGAGGAT TATTGTAAAA CGGCGTCGTT TATTAGTTTG 600
ACAATTGCAG TAGTAAATAG ACCAGGTTAA AAATAACGTA TCTGTTTGGT TATAAAGCGT 660
GTGGTGCATC TGGCATAACT TTACATGTGA TTATTTCACT CACCTTCAGC TTTTAGTTTT 720
CACTCACGCC GCCACCATTT TGGGTCCTGA CGAAGGAGAT AGGTTGCCGC CAATTGTCCT 780
GACTAAAAAT AATACTAGCA ACATTTCTCA TGGAATATGG ATATTTTAAT ACAACAAACG 840
AACTAAAATT TTGTTTTGAT TATGGATGTA AAATATAATT ATTTGACTCT ATTTAAGGGA 900
TAGCTCACGC AAAAATAAAA AGGTACTCCA TTTAATCGCC CTTCAAACTT TCTTCATTCT 960
TTTAAACATA TTTTTTTGAC GAAAGCTGAA AAACAAATGA CTTTTATAGC AGGAAAAACA 1020
AATATGAATG TGGATTGTTA CACGTTTCCA GGTTTCTTTA GAAATATCTT CTTTTGTGTT 1080
CAACAAAATA AAATAAGTCT AACAGTTTTG GAAGTGAAGG GTAAGTAAAT AATGACCAAA 1140
ACAAAATCAG TTTTTGGCGA ACGATCCCTT TAAAATCCCT TGTAAATAGT TACTTCAGGA 1200
CTAATTGAAT CAAATATTTA TATTTTTGCA AGTGTATATA TGTTAATATT TGACAATATC 1260
ATATTTAAAA AGGAGGTTCA TTACGCTGTG GCGACCCCTG ATAAATGAAG GACTAAGCCG 1320
AAGAAAAATT AAAGATTTAA AATTATATAC ATGTAATAAA AAGCAGGAAA CGTTTTCATT 1380
GGTTAACGTT TCAAGCGGCG TGATATTATT GGTTCATCAA AATATCAATC AAGGAGGCGG 1440
GATTTAGTGT AAAGAGGAAA GTGTTACGCC TATGACAGAC CAGTAGAGGG AGCTACTCAC 1500
TTACGCAATA AAAAAAATTA TACTGACAGG ATTTCGTTTT TACTGTGTTG AGACGTTTGT 1560
ATTATAGTCT GCA 1573