EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

DR011-01118

Organism

Danio rerio

Tissue/cell

Embryo_epiboly_80

Coordinate

chr1:34834822-34836546

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F7	MA0758.1	chr1:34835440-34835454	ATTTGGCGCGAAAG	-	6.01
FOXF2	MA0030.1	chr1:34836200-34836214	CCATCGTAAACAAA	+	6.19
IRF1	MA0050.2	chr1:34835224-34835245	GGATGCTTTCACTTTCGCATT	+	6.78
IRF2	MA0051.1	chr1:34835223-34835241	AGGATGCTTTCACTTTCG	-	6.44
SOX10	MA0442.2	chr1:34835768-34835779	TGCTTTGTTTT	-	6.02
SP1	MA0079.4	chr1:34836125-34836140	TTTGGGCGTGGCTTA	-	6.1

Enhancer Sequence

TATTTTATAA GTGAAAATGT GCACTTTAAT TTTAACAACC CACAGACATC GTCACCGAAT 60
ACAAATCGAG GTCAGACTTT CTCATATATA CAGAGCCATT TCAATTGTCA GGTTTTGTAG 120
AAATCGATCA ATTGAATTAA TCAATCTATT AAAGAAACGT TGACTATAAT TCTGTATTTT 180
AGGCTTAAAT TATAGAGAGA CATAGCAGAT GAACCGAGAC TGCATCAGAT CAATGTAAAT 240
CTTTCTTTCG AGCTGTCAGT GCGGAAATGA ACAAAACAAC AGGCCTAATA CAACATATTA 300
TACGATTAAA ATATGGAAAA ATTAACAGAT AGTAATTTCG GTCAATTTTC CTGACGGATA 360
AACCGAGATC AGGCTGGATA AACAGCTCTC GGTAATATTT CAGGATGCTT TCACTTTCGC 420
ATTTACCGGT AAGAATGACA TCTCGCCCTG CTCATCATTC CCTCTTTATA TAGCCGTATA 480
TATGGCTATT ACACGATCAT GATACACTGT GATATAGCCT GGGTCGTTAG TTCGTTGCAT 540
TGTTTTGTTT TCTCGCTACA ACCGATCCGC TCAATAGGAC AGAGACCGCG TCTCATTCAG 600
GCGATCTTGG ACTGATTGAT TTGGCGCGAA AGCGAGCGCA ACTGCTGGAT ATATGCCAAA 660
AAACGCGCTA ACGGGTGAAA CGAGACAGAT TCCGAAACAA ACGTCTATGT GTGAAGGCAC 720
CGTAAGATTG TATTTGCACA CAATTGACAG ACAGTCGCAG CACGCAGCTC TGGCTCGATC 780
TGGCAGGCAA AAAGGCAGCA GCTGGCCCGA TCGAGCCAGT AACATTTTGT ACACTGGCCC 840
GAGTGTCTCG CACGCTGGCC CCGGGCCATC GGGCAGTCCT TATTGTCGAG CCCTGGCTCA 900
TAATATCGAG TGGAAAAAAA GAAAAAGACC GCTGGGAAGC ATAACCTGCT TTGTTTTTTT 960
TATTTATTTT TTTAAAAGAA ACACAGTTTA GATCTGTTTA GGATAAGAGG AGTGTGAGTT 1020
ATTGCCACCT ATCATTGAAT GTGAATATCG AAAACAAAAC CAACTTAGCT TAACTCCTTT 1080
ACCGCCCCTC ACACAGCTTG ATCCACGCTG GCATTTCTCC TCTTGGGCTT TGGTTTTGAA 1140
AAGGGAAAAA ATCCCACCAC CCAGTCCAAA CTTTTAGGAT AGCGGGTGTC AGATTTTCAC 1200
AATCCAATTG CGCAACGATT TGGCTTGTTT CCCTCGCTCG AAAGCTTGAC AGAGCCTCTG 1260
CCCGTAGCTA CGATTGGTAA GCCGCGATTG GTGGGTGGCG GTTTTTGGGC GTGGCTTAGC 1320
GAAGGGTCAG TTTAAAAGGA GGATCCCGTG AGAGCAAAAG CACTAAAGGT ATGAGACGCC 1380
ATCGTAAACA AAAGTCAAGC GAACGCAAAG AGACTGAATG CACGAGAGAG AGAGAGAGAG 1440
AGAGAGAGAG GTGTATGTTG TATGTGTGAG AGAGAGAGAG AGAGAGAGAG AGAACGAGTA 1500
TTGGCACGCG AGTATTGGCT CGATCTCAAG TTCAAATTCA AATTCTCTCT GCGTTCGCTT 1560
GACTTTTGTC CACTCCGGCG CCTCATAGTA GTCACGTTGG ATACTGTCGA ATCAAAACAA 1620
TCTACCGTGC TTCGATTGGA CGTCATGCCG GAAGCGCGCA TGCTCACACA CACGCGCGCG 1680
CATGCTGTCA CACACACGCA CACATAAACG GGGAGAGAGA GAGA 1724