EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
DR004-46112 
Organism
Danio rerio 
Tissue/cell
Embryo_4.5hpf 
Coordinate
chr4:54315175-54315694 
TF binding sites/motifs
Number: 16             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
CDX2MA0465.1chr4:54315389-54315400TTTTATTGCTT-6.32
DUX4MA0468.1chr4:54315285-54315296TAATCCAATCA+6.02
EOMESMA0800.1chr4:54315348-54315361GAGGTGTGAAAAG+6.5
HNF4GMA0484.1chr4:54315423-54315438TGAACTTTGAACTGA-6.23
Hnf4aMA0114.3chr4:54315421-54315437TTTGAACTTTGAACTG-6.11
NFYBMA0502.1chr4:54315305-54315320AAACCGACCAATCAG+7.73
RXRGMA0856.1chr4:54315423-54315437TGAACTTTGAACTG-6.32
RxraMA0512.2chr4:54315423-54315437TGAACTTTGAACTG-6.11
SOX21MA0866.1chr4:54315462-54315477AACACTGAAATTGTC-6.71
Sox11MA0869.1chr4:54315462-54315477AACACTGAAATTGTC-7.35
Sox1MA0870.1chr4:54315462-54315477AACACTGAAATTGTC-6.42
TBR1MA0802.1chr4:54315349-54315359AGGTGTGAAA+6.02
TBX2MA0688.1chr4:54315348-54315359GAGGTGTGAAA+6.14
ZIC1MA0696.1chr4:54315331-54315345TACCCCCCACTGTG+6.43
ZIC3MA0697.1chr4:54315331-54315346TACCCCCCACTGTGC+6.55
ZIC4MA0751.1chr4:54315331-54315346TACCCCCCACTGTGC+6.57
Enhancer Sequence
CAAAACAAAG TATTTACTAT TAGTGTTTAT TATGTATCAT TATCTAAAGA CAAGAGGTTA 60
AAATGTAGCT TTAAAAACTG TGACCCTGAC CATGACCTGA CCATGTAACT TAATCCAATC 120
ACAGAAACTC AAACCGACCA ATCAGCAAGT GTCTGCTACC CCCCACTGTG CAAGAGGTGT 180
GAAAAGAAGC AGGTCTCTAG CAACACCTCA ACTTTTTTAT TGCTTTTTGT TCTTTTCTCT 240
CCTATGTTTG AACTTTGAAC TGAACTTTGA ACACCTTGAA CACTTGAAAC ACTGAAATTG 300
TCATTTCTTT TGACTTTTTA AAAAATGTAC CATTGACAAT TGCGGTGAAA TCTTTGATGC 360
CACTGATGGA GTAGACGGGG GCTGGGGCTG GGCCTCAAGT TGTCTCGTCT CCATCACCTC 420
CTGAGCAGGT ACAGTAGGGG CAGGTTGTTG CACCGTTTGT GCTGGAGCAG CAGAAGCAGT 480
ACTCTGCTGA AAATAAATCA CAAAAATACA TATAATCAT 519