EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
DR004-00644 
Organism
Danio rerio 
Tissue/cell
Embryo_4.5hpf 
Coordinate
chr1:20409211-20410119 
TF binding sites/motifs
Number: 9             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
CTCFMA0139.1chr1:20409616-20409635CACCGCCACCCGGTGGCCT-6.06
CTCFMA0139.1chr1:20409857-20409876TTGTCAGCAGGTGGCGCTA+6.75
KLF13MA0657.1chr1:20409432-20409450TTGCCACGCCCACTTCCG+6.46
KLF14MA0740.1chr1:20409433-20409447TGCCACGCCCACTT+7.73
MTF1MA0863.1chr1:20409484-20409498GAGGCGTGTGCAAA-6
SP1MA0079.4chr1:20409431-20409446TTTGCCACGCCCACT+6.18
SP3MA0746.2chr1:20409433-20409446TGCCACGCCCACT+6.71
SP4MA0685.1chr1:20409431-20409448TTTGCCACGCCCACTTC+6.99
SP8MA0747.1chr1:20409434-20409446GCCACGCCCACT+7.22
Enhancer Sequence
AGTTCGTTAA AATACAACGC CTGGAAATGG CAAAAACGCC ACTTTTTCGC CGCAGGAAGT 60
CAAAAATATC CGACTTCCTG TTGGGTTTGA GATATGGCTC CAAGAGACTT TTTCGTATGT 120
TTTGGTGTGT TTGAGGTGTG TGCCAATTTT CGTGCATGTG CGTGATTCGT ATATCGGGGG 180
CTCGTCCGTT TAATTTTTCT AGGTGGCGCT GTCGAGTCAT TTTGCCACGC CCACTTCCGA 240
AGCCCATAAC AAACGTAAAT TTTCGCCACT TCTGAGGCGT GTGCAAAGTT GCGTGAGTTT 300
TCGGGCATGT TTAGCCCCTC AAAACCGCGA TTCATTCCGC GGAAGAAGAA GAAGAAGAAT 360
AATTAAAGCT GCAAGCAGCG ATGATAGGGA CCTCGCACCC GGGCTCACCG CCACCCGGTG 420
GCCTCAGGAT GACAGAGAAC AGCGAACAGT AATAATTTAA GCCGATATGT TTAAAAAATC 480
TGAGAAAATC ACCGATTTAT GCCAAACCTC CTCCTCTCAG CAGGTAGCGC TATGACTGTG 540
ACTCAAGATT GGCATGTAGA TGTCACCAGG AGAGGAATCT TATCAACCAT GTGAAGTTTC 600
AGGCAGATCG AACATTGTTT AGCTGAGTTA TAAGCCAAAC TGCCTTTTGT CAGCAGGTGG 660
CGCTACGACA GACTCAATGT TGTTATGTAG ATGTGTTCAG GAGAGGACTT TTATCAACCA 720
TGTGAACTTT CAGGCAGATC GGACTTTGTG TGGTTGAGTT ATAATGCAAA CTACCATCTG 780
CCAGCAGGTG ATGCTATAAT TGTGACTTAA GATTGGCATG TAGATGCCTT CAGTAATGGA 840
ATTTAATCAA CCATGTGAAG TTTCAGGCAG ATCGGATGTT GTTTGGCTGA GTTATAAGCC 900
TATCTACC 908