EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
DR004-00389 
Organism
Danio rerio 
Tissue/cell
Embryo_4.5hpf 
Coordinate
chr1:13329168-13330605 
TF binding sites/motifs
Number: 14             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
CTCFMA0139.1chr1:13330487-13330506TAACGCCACCTGCTGGCAG-6.79
CTCFMA0139.1chr1:13330223-13330242TAGCGCCACCTGCTGGCAG-8.36
CTCFMA0139.1chr1:13330356-13330375TAGCGCCACCTGCTGGCAG-8.36
CTCFMA0139.1chr1:13329918-13329937TAGCGCCACCTGCTGGCCA-9.81
IKZF1MA1508.1chr1:13329323-13329335GGAACAGGAAGT+6.44
IKZF1MA1508.1chr1:13329803-13329815AAAACAGGAAGT+6.74
KLF13MA0657.1chr1:13329424-13329442TTGAAGTGGGCGTGGCAA-6.21
KLF14MA0740.1chr1:13329276-13329290AGAGGGGCGTGTCC-6.17
KLF14MA0740.1chr1:13329427-13329441AAGTGGGCGTGGCA-7.73
SP1MA0079.4chr1:13329428-13329443AGTGGGCGTGGCAAA-6.18
SP3MA0746.2chr1:13329428-13329441AGTGGGCGTGGCA-6.71
SP4MA0685.1chr1:13329426-13329443GAAGTGGGCGTGGCAAA-6.99
SP8MA0747.1chr1:13329428-13329440AGTGGGCGTGGC-7.22
SPICMA0687.1chr1:13329802-13329816CAAAACAGGAAGTC+6.22
Enhancer Sequence
ACGGAATTAT AAACTCCTCC CACAAATTTT ATCGTATCAA CACCAAAATT GAGTGGTGTT 60
ATCTGAAAGC TCTAGCGATG ATATATTGTG AAGATCTAGA GTTTTCGCAG AGGGGCGTGT 120
CCGTGGCGGT ATGACAAACC TCAACGCTTC GCCATGGAAC AGGAAGTCCT TATAACACAA 180
CCACACAATG TCTGATCTGC CTGAAACTTC ACATGGTTGA TAAACGTCAT CTCTTGAACA 240
CAGCCACATA ACAATATTGA AGTGGGCGTG GCAAAATGAC TCGACAGCGC CACCTAGAAA 300
AATTAAATGG ACGAGCCCCC GATCTACGAA TCACGCACAT GCACAAAAAT TGGCACACAC 360
CTCAAACATG GCAAAACATA CGAAAAAGTC TCTTGGAGCC ATATCTCAAA CCCAACAGGA 420
AGTCGGATAT TTTTAACTTC CTGTGGCGAA AAAGTGGCGC TTTTGCCATT TCCAGGCGTT 480
GTATTTTAAC GAACTCCTCC AAGGGATGTT ATCTGATAAA CACCAAAATT GGGTTTTGTC 540
ATCTTAAAGC CTTGGTGATG TTAAATTGCG AAGCTTTAGA GTTTTCATCG ATGGGCGTGT 600
CCGTGGCGGC CTCGCAAACT TTGATGATTC GCCACAAAAC AGGAAGTCTT TATAACTCTG 660
GCATGCATTA TCCGATCTGC CTCAAAATTC ACACATTTAA TAACAGTCCT GACCTGAACA 720
GGTTTACGTG CCGATATCCA GTTACAGCTA TAGCGCCACC TGCTGGCCAC AGGAAATGAC 780
ATGTTTGACA CTCTAACAAA CTCCTCCCAC AAACTTTCCC GTATCAGCAC CAAAATAGAG 840
TGGTGTCATC TGAAAGCTCT AGCGATGATA TATTGTGAAG ATCTAGAGTT TTTGCAGAGG 900
GGCGTGTCTG TGGTGGCATG ACAAACCTCA ACGCTTCGCC ATGGAACAGG AATGCCTTAT 960
AACTCAACCA CACAATGTCT GATCTGCCTG AAACTTCACA TGATTGATAA AAGTCCGCTC 1020
CTGAACACAT CCACATAACA ATATTGAGTC AGTCATAGCG CCACCTGCTG GCAGAAGGTA 1080
GTTTGGCTTG TAACTCGGCC ACACAATGTC CGATCTGCCT GAAACTTCAC ATGGTTGATG 1140
AAAGTCCTCT CTTGAGCACA TCTACATAAT AATATTGAGT CAGAGTCATA GCGCCACCTG 1200
CTGGCAGAAG GAATTTTGGC TTGTAACTCG GCCACACAAT GTCAGATCTG CCTAAAATGT 1260
CACATGGCTG ATGAAAGTCC TCTCCAAAAC ACATCTACAT AATAATATTG AGTCAGTCAT 1320
AACGCCACCT GCTGGCAGAA GGTAGTTTGG CTTATAACTC AGCCACACAA TGTCCCATGT 1380
GCCTGAAACT TCACATGGTT GATAAGACTC CTCTCCGGAA GACATCTACA TGCCAAT 1437