EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
DR002-42409 
Organism
Danio rerio 
Tissue/cell
Embryo_24hpf 
Coordinate
chr3:60466555-60467292 
TF binding sites/motifs
Number: 40             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
RFX1MA0509.2chr3:60466857-60466873GGTTACCATAGTAACT+6.42
RFX1MA0509.2chr3:60466857-60466873GGTTACCATAGTAACT-6.4
RFX1MA0509.2chr3:60466590-60466606TGTTACCATAGCAACT-6.54
RFX1MA0509.2chr3:60466644-60466660TGTTACCATAGCAACT-6.54
RFX1MA0509.2chr3:60466752-60466768TGTTACCATAGCAACT-6.54
RFX1MA0509.2chr3:60466590-60466606TGTTACCATAGCAACT+6.55
RFX1MA0509.2chr3:60466644-60466660TGTTACCATAGCAACT+6.55
RFX1MA0509.2chr3:60466752-60466768TGTTACCATAGCAACT+6.55
RFX2MA0600.2chr3:60466857-60466873GGTTACCATAGTAACT-6.74
RFX2MA0600.2chr3:60466857-60466873GGTTACCATAGTAACT+6.77
RFX2MA0600.2chr3:60466590-60466606TGTTACCATAGCAACT+6.82
RFX2MA0600.2chr3:60466644-60466660TGTTACCATAGCAACT+6.82
RFX2MA0600.2chr3:60466752-60466768TGTTACCATAGCAACT+6.82
RFX2MA0600.2chr3:60466590-60466606TGTTACCATAGCAACT-6.86
RFX2MA0600.2chr3:60466644-60466660TGTTACCATAGCAACT-6.86
RFX2MA0600.2chr3:60466752-60466768TGTTACCATAGCAACT-6.86
RFX3MA0798.1chr3:60466857-60466873GGTTACCATAGTAACT+6.39
RFX3MA0798.1chr3:60466590-60466606TGTTACCATAGCAACT+6.48
RFX3MA0798.1chr3:60466644-60466660TGTTACCATAGCAACT+6.48
RFX3MA0798.1chr3:60466752-60466768TGTTACCATAGCAACT+6.48
RFX3MA0798.1chr3:60466857-60466873GGTTACCATAGTAACT-6.67
RFX3MA0798.1chr3:60466590-60466606TGTTACCATAGCAACT-6.73
RFX3MA0798.1chr3:60466644-60466660TGTTACCATAGCAACT-6.73
RFX3MA0798.1chr3:60466752-60466768TGTTACCATAGCAACT-6.73
RFX4MA0799.1chr3:60466857-60466873GGTTACCATAGTAACT+6.17
RFX4MA0799.1chr3:60466590-60466606TGTTACCATAGCAACT+6.28
RFX4MA0799.1chr3:60466644-60466660TGTTACCATAGCAACT+6.28
RFX4MA0799.1chr3:60466752-60466768TGTTACCATAGCAACT+6.28
RFX4MA0799.1chr3:60466590-60466606TGTTACCATAGCAACT-6.69
RFX4MA0799.1chr3:60466644-60466660TGTTACCATAGCAACT-6.69
RFX4MA0799.1chr3:60466752-60466768TGTTACCATAGCAACT-6.69
RFX4MA0799.1chr3:60466857-60466873GGTTACCATAGTAACT-6.74
RFX5MA0510.2chr3:60466857-60466873GGTTACCATAGTAACT+7.05
RFX5MA0510.2chr3:60466857-60466873GGTTACCATAGTAACT-7.11
RFX5MA0510.2chr3:60466590-60466606TGTTACCATAGCAACT+7.13
RFX5MA0510.2chr3:60466644-60466660TGTTACCATAGCAACT+7.13
RFX5MA0510.2chr3:60466752-60466768TGTTACCATAGCAACT+7.13
RFX5MA0510.2chr3:60466590-60466606TGTTACCATAGCAACT-7.14
RFX5MA0510.2chr3:60466644-60466660TGTTACCATAGCAACT-7.14
RFX5MA0510.2chr3:60466752-60466768TGTTACCATAGCAACT-7.14
Enhancer Sequence
GAATTATTAC ACCACCCAAA CGAGTACAGT TGTTGTGTTA CCATAGCAAC TATAGAATCA 60
CCACAACAGA TCAATGACTA TAGTTGCCGT GTTACCATAG CAACTGTATA ATCACCATAA 120
AAGAAAAATT ACTGTAGTTG TTGTGCTACC ATAGCAACTA CATAATCACC ACAATAGATC 180
AATGATTGTA GTTGTTGTGT TACCATAGCA ACTATTAAAT CATAACAACA GCCAAACGAC 240
TACAGTTTTT GTGTTAACAT AGCAACTATA GAATCACCAT ACAGATCAAT GTCTATAGTT 300
GTGGTTACCA TAGTAACTAT AGAATATCCA CGACAGATTA ATTGGATTGA AATAACCTAT 360
CATTGCTGAA GTCTTCTAAT TACTCTTTAC TGTTGCTATG CAGTTGCTAG GCTGTAATGA 420
ATGATTACAA GAGCAATGCT ATGTAGTCTC TGATATTATG GTCATGTTGA TCCTTTAAGA 480
CTTCAATGAG AGTTTGTTTT TGTGGATTTT ATTGTTTGAC TATTTGAAAA TAGCGCATGG 540
CTAAGCATGA CAGGGCAGCT GCTTCCAAAA TAGCAGCTTT ACTCCCCCTC TGAAACCAAA 600
CTTTATCACT TTAAGAGTCT TGGCATCCAC CGAGCACCAG CAGATGGTGC ATTCCATCTC 660
ACACAGCCAC AAAAATGCAT TTATGATGTG TGAGAGAGAC TGAAAATAAA CCCTCCAATC 720
CCACTGACAC ACTGCTG 737