EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
DR002-40188 
Organism
Danio rerio 
Tissue/cell
Embryo_24hpf 
Coordinate
chr3:10296216-10297010 
TF binding sites/motifs
Number: 12             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
PBX2MA1113.1chr3:10296324-10296336GTGATTGACAGC+6.92
PRDM1MA0508.2chr3:10296264-10296274GTGAAAGTGA-6.02
RFX1MA0509.2chr3:10296373-10296389CGTCGCCATGGCAACA-7.19
RFX1MA0509.2chr3:10296373-10296389CGTCGCCATGGCAACA+7.2
RFX2MA0600.2chr3:10296373-10296389CGTCGCCATGGCAACA+7.18
RFX2MA0600.2chr3:10296373-10296389CGTCGCCATGGCAACA-7.33
RFX3MA0798.1chr3:10296373-10296389CGTCGCCATGGCAACA+7.32
RFX3MA0798.1chr3:10296373-10296389CGTCGCCATGGCAACA-7.53
RFX4MA0799.1chr3:10296373-10296389CGTCGCCATGGCAACA+7.09
RFX4MA0799.1chr3:10296373-10296389CGTCGCCATGGCAACA-7.16
RFX5MA0510.2chr3:10296373-10296389CGTCGCCATGGCAACA+7.02
RFX5MA0510.2chr3:10296373-10296389CGTCGCCATGGCAACA-7.1
Enhancer Sequence
CACAGAAGGA AAGAAAGAAA GGAGTCTTTT AAAGCAAAGC CTGTGCAGGT GAAAGTGAAC 60
CAGTGTGTGT GTGTTGTATA TGTGTGTGTG TTACGGGGGG AGGATGGAGT GATTGACAGC 120
TCACACGCCA GCCATTATAG TGAGGTGCTG CCAGCAGCGT CGCCATGGCA ACAGTCCAGG 180
GGCCCGACAG AACAAAGAAG CGGGAGCCCA CTGTGTGTGT GTGTGTGTGT GTGTGTGAAA 240
GACCAACGGC CTCCAGCGCT CATATTTACA TGCGACGCTC AAGGGTTAAT TGCTGTGAAT 300
TCCTGGGCTG CGTGTGAACT GACTGCGTCG GCTTTGATTT TACATCGCAA AGAAAAGAAG 360
CACACACTTC CAGAGTTACA GATGTTCAGA GCCTGATTAT TCAGATCATT TCACATCTAA 420
AACATGTCTT GATCGATTCT ACCAGATAAA GGTGAAATTG AAATTGAACT TGAGATGTTC 480
CTTCAGCTTA AAACGACTCT CAAGTGTTGA CTTCAATAAT GTTTGTGCCT AAAATTGCCA 540
ATTTTATTTT ATTTTTAGGG ATCCGAGCAC CGAAACGGTG TGTAGGCCCT ATTGGAATTG 600
CTCCATTCTT CTTTTTTTCT AGAATGAATC GCAATTTTGA GGGTCTAAAC ATGTTCGAAA 660
ATTTTGCACA CTTGCCAGAA GTGGTAAAAA TGTACATTTA TTATAGGGTT TTGGAAGTGG 720
GTGAAGCAAA CTGGCTCAAC AGCGCCACCT ATGCGCTCCC AAGCTACGTT TCATGCACAC 780
ATACGAAAAT TGGC 794