EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
DR002-40031 
Organism
Danio rerio 
Tissue/cell
Embryo_24hpf 
Coordinate
chr3:5320314-5321333 
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
IRF1MA0050.2chr3:5320509-5320530TAAATGAAAGTGGAACTAAAG-6.99
RFX2MA0600.2chr3:5320948-5320964TGTCGCCATGGAAACT-6.05
RFX3MA0798.1chr3:5320948-5320964TGTCGCCATGGAAACT-6.12
SRFMA0083.3chr3:5321150-5321166TTACCAAATAAGGTCA+6.47
Enhancer Sequence
AATGCATAAA ATCTGTTAAA ACGAAGGGTT CCACATAATT CATTCATGCT GTGCCAACAC 60
AAATCGAAAG TTAACAAGTT TAAGTGAATT GAACATAACA CTATGAGGAT CTCAGGAATT 120
GTGTTGTTTC CAGCTTATTT TAATTCAGCA ATTTGAGCAG CGATAAGGAT TTCTGGACTA 180
TTTTCTGAAG TCCTTTAAAT GAAAGTGGAA CTAAAGCGAA GATTCCTTAT AATAGAAAGC 240
CCCATACATA ATAAGCACGT GTGAAATCAA ACGCGGCGCG CATGAATGAT CGCGCACGGA 300
GGCTGAAGAA TGCGAGGAAT GCGGAATGAG GATCCAGGAG AGACCCGGGC CGCCGGGAGG 360
GTTATATCAG CGGGTCAGGA ATGTTTGTGC ACTCGCGCAG TCTCTCTCTC TCTCTCTGCA 420
TCACCCATGT GCCGGAAAAA TCAATCCACC GCTGTTCTCT CTGCTGATTG GGCAGTTGTA 480
GCTCTTTGAG CAGTATGGTG TTGGGTAGTC CCCCACTTGT AGGATTTATA TTTCTGTCAT 540
TCTGTGCTGC ACATTGAGTT CAGAATGTAA CTGCCAAATA ACTGTCAGAT TTTCAAATAT 600
TCGAATTGGC CACTGATTCT AACTAAAGCG TGTGTGTCGC CATGGAAACT AAAAGGAATA 660
ACGAACAACA TTTTGAATTT TCAAAAAGTG TAAAGCCGTT AAAAACTGCC CTCAAGGGAG 720
ACCGTCGAGC TTACCAGTGA AAGGCTTGAG GAATTTCTAA TGCAAAGTCA AAGGTCTCGA 780
CGTGAGTGAT GCCAGATGTA GAGAAGCAGG CTGAGGGAGA GAAAGAGAGA GACTGATTAC 840
CAAATAAGGT CACTTCTGAC CTCTCTCTCT CTCTCTCTCT CCAGCAGTTG TGTTGTGTTG 900
TGCCGCCCGG TCTGGGTGTG TCTCGGCCGC TGGGTGTGTT CCCGAATAAT GGCACACCAA 960
CAAAACTTTC TCTGTCAACG CTTTACATGC GGCGTCTGGA GGGAAGGGGA GAACGTGCT 1019