EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

DR002-00406

Organism

Danio rerio

Tissue/cell

Embryo_24hpf

Coordinate

chr1:8842480-8843454

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr1:8843337-8843356	TACTGCCATCTACTGGTCT	-	6.79
FOXC2	MA0846.1	chr1:8843308-8843320	TTTGTTTACTTT	-	6.62
FOXP2	MA0593.1	chr1:8843308-8843319	TTTGTTTACTT	-	6.62
Foxj3	MA0851.1	chr1:8843305-8843322	TGCTTTGTTTACTTTCT	-	7.65

Enhancer Sequence

CAAACACACG CCGTGCTTCC TAAATACCCC GGTATAGGAA TATCCTCATG TTAGAATAAT 60
CACAAAACCT CTGCAGCACA TTGATAAAAA TATTATTTTA ATTTCCAATC TTCAGAAAAA 120
AAGACCGTGC CAAGCCAGAC ACCATTACAT GACACAAAGA AAGAAAGGCA CAAAAATGCT 180
TGTATTAACA ATGTAAATGC ATTTCTCATG TGTGGCTAAA GAAAATATAT GCTAACGCTA 240
ACGTGTATTG GCTTTCCACT TATTTATTTT TAATGAATGG CGCATTGCAT ATATTTTTCC 300
AGGCACTTCA TTGCATCACA CATCATATAT CTGTTGCACA TAATGATCAA GACTGACATG 360
AAACATTCAG CAGCACACAC AACAGATTAA ATGCATACTT ACTTCTTATG CAGAAAAAAT 420
ATCTGATGCT ATATGGTTTT GGTGTCTAAT AGGCTACATT ACATCGGCAA ACATGCTCTG 480
GTCATGCGCG CTGGTAAATG TTACGGATAT TTCATGTCTT ATGAAGTTGC TGTTGTTGTG 540
CGTGTCCTAC GGTAGCGATA AGAATCTGAT TCACTTAGTA AATCGGCTCT TTAAGACAGA 600
TCATTACAGT GAACCGGTTC ACTGGTTCAA TCTGGTCCTC GCAAAAAAAA AGCTTCAGCG 660
GAATTTTTGA TGATTTGTTT TTTTTGTTTG TGTGTGGTAA AGTGATGTAA ATTGCATTTT 720
CTCACCCATA TCTCAGTTTT GACTCTTTAT GTAGATTGTA TCACTTTGCG AATTGATTTG 780
AATGAAGCCT CGCAAAGAGC CGGTTAAAAA TAATGATTTC TTCCTTGCTT TGTTTACTTT 840
CTCTCCAGTT ATTTCATTAC TGCCATCTAC TGGTCTGGAA ACAATTTATT TTATTGGATT 900
GATTTGTTTG AGAACCTAAA AACGAAATAG GAAAACTTAA TATTCAAATA ATTTGAAAAA 960
AATAAATAAA TAAA 974