EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
DR001-24263 
Organism
Danio rerio 
Tissue/cell
Embryo_2.5hpf 
Coordinate
chr3:12087319-12088045 
TF binding sites/motifs
Number: 13             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
IRF1MA0050.2chr3:12087741-12087762TAAACGAAAGTGAAAGCGGGG-7.18
IRF7MA0772.1chr3:12087744-12087758ACGAAAGTGAAAGC+6.54
IRF9MA0653.1chr3:12087743-12087758AACGAAAGTGAAAGC+6.36
RFX1MA0509.2chr3:12087542-12087558TGTTTCCATAGCAACG-6.56
RFX1MA0509.2chr3:12087542-12087558TGTTTCCATAGCAACG+6.58
RFX2MA0600.2chr3:12087542-12087558TGTTTCCATAGCAACG+6.87
RFX2MA0600.2chr3:12087542-12087558TGTTTCCATAGCAACG-6.98
RFX3MA0798.1chr3:12087542-12087558TGTTTCCATAGCAACG-6.91
RFX3MA0798.1chr3:12087542-12087558TGTTTCCATAGCAACG+6.93
RFX4MA0799.1chr3:12087542-12087558TGTTTCCATAGCAACG-6.45
RFX4MA0799.1chr3:12087542-12087558TGTTTCCATAGCAACG+6.5
RFX5MA0510.2chr3:12087542-12087558TGTTTCCATAGCAACG+6.87
RFX5MA0510.2chr3:12087542-12087558TGTTTCCATAGCAACG-6.95
Enhancer Sequence
GCCTTATGAA AACTAGCTCC GCTTGTGATT ACTGTTTTTA ATTTCACGCT AAAATGTTAA 60
AGATATTTTA ACTGACTGTA TTGATTTCTT ACCAAACGAC TAGCCGACAT TACAGTGACC 120
TGCACAGCCA CAGCTCTCCC GAACTCTCTG TTATTCTCCA TGTTAAAAAA AACAAGCTAA 180
TTCAGTTTCT CCTCACCACT AAACAACCGT TGCTCAACGA GCTTGTTTCC ATAGCAACGA 240
TGCACAGTGT AGGTCTCGCG ATACGTGAAC GTGGTGTTTT GAAGCCGCGC TGCTGTGTGG 300
ACGTGAACGC AGCACAGGAG GGTGACGCTG AAGTTTTCGT TTTTCTCTTG CTTTATTTTG 360
ACAGTCCGAG TTAAATGTTT AATTCAAGTT CACAAATGAG CTAAAGGTAC TTGCTGGATA 420
GCTAAACGAA AGTGAAAGCG GGGTTCGTAG ACAACAACGC GCGTGCTTCC GGCGGGTAAC 480
TTGAATCACT CACTCCATGA TAAGAGTCTT AAAAGTTTCT ATAACGTTTC AAATGAGTTG 540
TTATTGTTAA GTTCGCACTT TGTAGTAAAG ATACAGAACT GAGCTTTATA ACAGAAAAAT 600
ATGGCTGTTA CATAACTGAA ATTTGTGACA TCTGTGCTTG AATACACTCG CCGGCCACTT 660
TATTAGGTAC ACCTTTGTTG GACCCCCTTT TACCTTCAGA ACTGCCTTAA TCCTTCGTGG 720
CATAAA 726