EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

DR001-14683

Organism

Danio rerio

Tissue/cell

Embryo_2.5hpf

Coordinate

chr19:40160558-40162426

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXC2	MA0846.1	chr19:40162178-40162190	AAAGTAAACAAA	+	6.62
FOXP2	MA0593.1	chr19:40162179-40162190	AAGTAAACAAA	+	6.62
Foxj3	MA0851.1	chr19:40162176-40162193	AAAAAGTAAACAAATAA	+	7.28
Lhx3	MA0135.1	chr19:40161221-40161234	ATTTAATTAATTT	-	6.07
TFAP2A	MA0003.3	chr19:40161531-40161542	AGCCTGAGGCG	-	6.14
TFEC	MA0871.2	chr19:40161715-40161726	CCCACGTGACA	+	6.02

Enhancer Sequence

ACAGTTATAT GTGTAATAAT AGGCAAAACA GTGGCTCAGT GGTTAGCACT GTTGCCTCAC 60
AGCAAAAAGG TCGCTGGATC GAGTCCCGGC TGGACCAGTT GGCATTTCTG TGTGGAGTTT 120
GCATGTTCAC CCCGTGTTGG CGTGGGTTTC CTCCGAGAGC TCCGGTTTCC CCCACAGGCC 180
AAAGACATGC TCTATAGGTG AATTGAATAA ACTAAACTGG CCGTAGTGTA TGAGTGTATC 240
TGAGAGTGTA CGGATGTTAG GGTTGGGTTG ATAGATAATG CTGTCATCCA TTGATGATGG 300
CCAATAGACA TCACGCTGCT GAGCCGACAT CGCGGTCCTC TGCCCCGCTC CGTTGCAGCA 360
GCAACCTGCT CACAAAAGAA TCGTTTATAC TAATACATCT TAGTTTTAAA AGGGCATATT 420
GGAACAAAAA CAACCCACAT CCGCACTGGC GTTTCACCTA GCTTTTCTGT ATAGCCTCCT 480
TCCACAGTAT ACCGCTGAAA CCGCACATCA CATGACCACA CACACTCTGT CATGCACTGC 540
TGTGTAGGCT ATGCGCGTGT CTGACTCTGT GCTTCAGTAG TCACCCTAGA GAGCAGTGCA 600
CGTTGAACAG TTTATTAAGG ATTTACCGCT GGATCGCGTC TCACTAAAGT TGTTAAAAGT 660
GATATTTAAT TAATTTTGTC TCTATCTAAC GACTCTCCAG TCTTTTGAAT CTATCAGGTC 720
ACATGTCAAA GCGTCAGTAC ACTTCTTCAA TCTTTCGATT TCATGTGTGT ACTTAGTAAT 780
TTTAGCGAAA ACCTCAGATA CTGTTGGTTG GTTGCTGTTG GTTGTGCACC TTTTTTACCC 840
AACACATTCT CACTCCCAAC TCGTCACATA CTGACGCTTG GTCAGGAACC CTCGGCGTAG 900
GTTATTGACG CACAGGGTAC CCCTTTAGCG TCATATTTAG ACGTGCAGGG ATTCCCTATA 960
GAATATGTAC CTGAGCCTGA GGCGTCATAG GGAGACGCTG GAGGCTCGTA TAATTACCAA 1020
TAGATGTCAA CGCAATTTTT AAAACCTGAT TTACGCCTAT TATCTTAGTT TTCTTATTTT 1080
AAAAATATGT AATTTTTATT TTGTTCATGA AAAGCGTCTG TTAACGGGGT CGAAACTACT 1140
GTATGAATAA ACTTCGGCCC ACGTGACATC CCTTCACGGT GAGTTTAACG CCGCTCTGCT 1200
ATTGGTCAAA CTGCATCAGC GGTGAGTTCT CAGATGAGTT CAACTGTCAA CATTAAATAT 1260
TACGTTAATG CTGCATAATA TATTTTTATT GGAGATTAGT TGGTGTTTAT AAATATGTTA 1320
TCATTTACTT TATATTTAAT GAGTGAAAAT ATATTCGGTT GTCCAGTTTA GGGTAACTAT 1380
GCCTAATAAA ACTTTGATTC ATTCATATTA TTTATTATTT ACTTTATTAT TTTACTTTAA 1440
AAAAATATTA AATTTCAAGT ACTAAGTTTA AAAATGTTTT CAGCTGATAT TTTTCATTTT 1500
AAATTATTTA TTAAAGTTGG GGTCATTGTA TGTGGCGATC TATTTTTTAC AGTCTATGCT 1560
CGCTATCCCA AGGTTCATTG CGATCCCAAG GTTCACTGCG GTTTTCCACA AGGTAAGTAA 1620
AAAGTAAACA AATAAACACG ATTTGTTGAT AAAGCATGTA CTGTAAACTA GCGACGTTAT 1680
CTAATTACAT CAAGTTCATT TATTAAAAAC ATATTTTTCT CACATATAAC GTTGGTCATG 1740
CATTAGAACA ATATACATTT TAAGATAAGG AACAGTGTAA CCAGATTGTT GTTTTCCACA 1800
ATAGAATTCG TGCAAAATCT ATATATAATA TGCAATATGC AACTCTAATA ATACAAATGT 1860
ATTCGTAA 1868