EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

DR001-00921

Organism

Danio rerio

Tissue/cell

Embryo_2.5hpf

Coordinate

chr1:34835007-34836143

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F7	MA0758.1	chr1:34835440-34835454	ATTTGGCGCGAAAG	-	6.01
IRF1	MA0050.2	chr1:34835224-34835245	GGATGCTTTCACTTTCGCATT	+	6.78
IRF2	MA0051.1	chr1:34835223-34835241	AGGATGCTTTCACTTTCG	-	6.44
SOX10	MA0442.2	chr1:34835768-34835779	TGCTTTGTTTT	-	6.02
SP1	MA0079.4	chr1:34836125-34836140	TTTGGGCGTGGCTTA	-	6.1

Enhancer Sequence

TAAATTATAG AGAGACATAG CAGATGAACC GAGACTGCAT CAGATCAATG TAAATCTTTC 60
TTTCGAGCTG TCAGTGCGGA AATGAACAAA ACAACAGGCC TAATACAACA TATTATACGA 120
TTAAAATATG GAAAAATTAA CAGATAGTAA TTTCGGTCAA TTTTCCTGAC GGATAAACCG 180
AGATCAGGCT GGATAAACAG CTCTCGGTAA TATTTCAGGA TGCTTTCACT TTCGCATTTA 240
CCGGTAAGAA TGACATCTCG CCCTGCTCAT CATTCCCTCT TTATATAGCC GTATATATGG 300
CTATTACACG ATCATGATAC ACTGTGATAT AGCCTGGGTC GTTAGTTCGT TGCATTGTTT 360
TGTTTTCTCG CTACAACCGA TCCGCTCAAT AGGACAGAGA CCGCGTCTCA TTCAGGCGAT 420
CTTGGACTGA TTGATTTGGC GCGAAAGCGA GCGCAACTGC TGGATATATG CCAAAAAACG 480
CGCTAACGGG TGAAACGAGA CAGATTCCGA AACAAACGTC TATGTGTGAA GGCACCGTAA 540
GATTGTATTT GCACACAATT GACAGACAGT CGCAGCACGC AGCTCTGGCT CGATCTGGCA 600
GGCAAAAAGG CAGCAGCTGG CCCGATCGAG CCAGTAACAT TTTGTACACT GGCCCGAGTG 660
TCTCGCACGC TGGCCCCGGG CCATCGGGCA GTCCTTATTG TCGAGCCCTG GCTCATAATA 720
TCGAGTGGAA AAAAAGAAAA AGACCGCTGG GAAGCATAAC CTGCTTTGTT TTTTTTATTT 780
ATTTTTTTAA AAGAAACACA GTTTAGATCT GTTTAGGATA AGAGGAGTGT GAGTTATTGC 840
CACCTATCAT TGAATGTGAA TATCGAAAAC AAAACCAACT TAGCTTAACT CCTTTACCGC 900
CCCTCACACA GCTTGATCCA CGCTGGCATT TCTCCTCTTG GGCTTTGGTT TTGAAAAGGG 960
AAAAAATCCC ACCACCCAGT CCAAACTTTT AGGATAGCGG GTGTCAGATT TTCACAATCC 1020
AATTGCGCAA CGATTTGGCT TGTTTCCCTC GCTCGAAAGC TTGACAGAGC CTCTGCCCGT 1080
AGCTACGATT GGTAAGCCGC GATTGGTGGG TGGCGGTTTT TGGGCGTGGC TTAGCG 1136