EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

DM013-15396

Organism

Drosophila melanogaster

Tissue/cell

L3_brain

Coordinate

chr3L:13823798-13824280

Target genes

Number: 23
Name	Ensembl ID

CG43894	FBgn0264486
CG14118	FBgn0036323
CG14115	FBgn0036343
CG34428	FBgn0085457
CG34429	FBgn0085458
CR43652	FBgn0263661
CG17300	FBgn0036345
CG33262	FBgn0053262
snky	FBgn0086916
tRNA	FBgn0052129
CG9592	FBgn0036426
CG4613	FBgn0036427
CG43246	FBgn0262891
Mpcp	FBgn0026409
CG42758	FBgn0261816
HGTX	FBgn0040318
dlp	FBgn0041604
CG43121	FBgn0262581
ome	FBgn0259175
CG5048	FBgn0036437
CG13477	FBgn0036438
CG17177	FBgn0036440
CG13473	FBgn0036442

TF binding sites/motifs

Number: 22

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CG18599	MA0177.1	chr3L:13824049-13824055	AGAGGC	+	4.01
CG9876	MA0184.1	chr3L:13824049-13824055	AGAGGC	+	4.01
E5	MA0189.1	chr3L:13824049-13824055	AGAGGC	+	4.01
Kr	MA0452.2	chr3L:13823982-13823995	ATTGCCATTTTAA	-	4.76
Lim3	MA0195.1	chr3L:13824049-13824055	AGAGGC	+	4.01
OdsH	MA0198.1	chr3L:13824049-13824055	AGAGGC	+	4.01
PHDP	MA0457.1	chr3L:13824049-13824055	AGAGGC	+	4.01
Pph13	MA0200.1	chr3L:13824049-13824055	AGAGGC	+	4.01
Rx	MA0202.1	chr3L:13824049-13824055	AGAGGC	+	4.01
Vsx2	MA0180.1	chr3L:13824049-13824057	AGAGGCAA	-	5.22
ap	MA0209.1	chr3L:13824049-13824055	AGAGGC	+	4.01
bap	MA0211.1	chr3L:13823799-13823805	ATTAAT	-	4.1
br	MA0010.1	chr3L:13824098-13824111	CGCATATGGGAAG	+	4.18
dve	MA0915.1	chr3L:13824199-13824206	TCGAGAA	+	4.32
h	MA0449.1	chr3L:13824168-13824177	AGCACCTAA	+	4.09
h	MA0449.1	chr3L:13824168-13824177	AGCACCTAA	-	4.09
ind	MA0228.1	chr3L:13824049-13824055	AGAGGC	+	4.01
onecut	MA0235.1	chr3L:13823940-13823946	AATTCA	-	4.01
ro	MA0241.1	chr3L:13824049-13824055	AGAGGC	+	4.01
tll	MA0459.1	chr3L:13823872-13823881	AGGTGCACA	+	4.12
tll	MA0459.1	chr3L:13824033-13824042	AAAGTTTGT	+	4.16
vnd	MA0253.1	chr3L:13823799-13823807	ATTAATTT	-	4.1

Enhancer Sequence

TATTAATTTT GGCCACAAAA AGGTACCACC ATTCAGCCTA TAGTGCAGTG GTCAAAAAAT 60
TGTTGCATAC TTCAAGGTGC ACATTTTGGA AACCGAAGGA TTACGAGTGC CAAAACCGAG 120
TTGCAACTGT TAAATTGCCG GCAATTCAAA GGATGCGAGC AAATTCGTGG CTTCTGCTGA 180
CTGAATTGCC ATTTTAAGAC AGACACCCAC ACACGTGGAT GCCTATTTCC GGTTGAAAGT 240
TTGTGGGAGT AAGAGGCAAG ACACATTAAG TTTGCCATTA AATTCAAAAT ACGTGGGAAA 300
CGCATATGGG AAGTGCAACA GCTGCATATT GTTTGATAAA TAAATAGTAA AAATACACAT 360
ACTCACGCAG AGCACCTAAA TCACGCACAT TCGTGTACAC TTCGAGAAAT GACTTGGAAG 420
CAATAAAGGA TCTCAAATAT GAGTAAGCAG TACTGTAATA ATTATTAAGG TGAGTTACCA 480
AA 482