EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

DM002-14844

Organism

Drosophila melanogaster

Tissue/cell

BG3-c2

Coordinate

chr3R:12683242-12683979

Target genes

Number: 29
Name	Ensembl ID

CG31291	FBgn0051291
CG4221	FBgn0038385
CG5478	FBgn0038386
Sap47	FBgn0013334
CG31088	FBgn0051088
mor	FBgn0002783
CR42839	FBgn0262028
GATAe	FBgn0038391
pnr	FBgn0003117
Mhcl	FBgn0026059
Sb	FBgn0003319
CG5916	FBgn0038401
Fer2	FBgn0038402
CG6006	FBgn0063649
CG8925	FBgn0038404
Bin1	FBgn0024491
CG6126	FBgn0038407
CG43196	FBgn0262825
CG14322	FBgn0038532
CG31251	FBgn0051251
osa	FBgn0261885
Lgr1	FBgn0016650
CG43102	FBgn0262562
CG7713	FBgn0038545
CG17803	FBgn0038547
CG17806	FBgn0038548
CG17802	FBgn0038549
CG17801	FBgn0038550
tinc	FBgn0261649

TF binding sites/motifs

Number: 21

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

B-H1	MA0168.1	chr3R:12683261-12683267	TTATTT	-	4.01
B-H2	MA0169.1	chr3R:12683261-12683267	TTATTT	-	4.01
C15	MA0170.1	chr3R:12683261-12683267	TTATTT	-	4.01
CG11085	MA0171.1	chr3R:12683261-12683267	TTATTT	-	4.01
CG15696-RA	MA0176.1	chr3R:12683261-12683267	TTATTT	-	4.01
CG32532	MA0179.1	chr3R:12683261-12683267	TTATTT	-	4.01
CG34031	MA0444.1	chr3R:12683261-12683267	TTATTT	-	4.01
Eip74EF	MA0026.1	chr3R:12683849-12683855	ATCTTG	+	4.01
Hmx	MA0192.1	chr3R:12683261-12683267	TTATTT	-	4.01
Mad	MA0535.1	chr3R:12683665-12683679	TGGACATGCTGTCA	+	4.15
NK7.1	MA0196.1	chr3R:12683261-12683267	TTATTT	-	4.01
brk	MA0213.1	chr3R:12683575-12683582	GTATTGA	+	4.64
cnc\|maf-S	MA0530.1	chr3R:12683934-12683948	TCAATTTCATATCG	+	5.04
dl(var.2)	MA0023.1	chr3R:12683857-12683866	ATGTTAATC	+	4.35
lms	MA0175.1	chr3R:12683261-12683267	TTATTT	-	4.01
onecut	MA0235.1	chr3R:12683257-12683263	CCTCTT	-	4.01
slou	MA0245.1	chr3R:12683261-12683267	TTATTT	-	4.01
ttk	MA0460.1	chr3R:12683728-12683736	TCTGCTCC	+	4.52
twi	MA0249.1	chr3R:12683567-12683578	ACAATATCGTA	+	4.35
unc-4	MA0250.1	chr3R:12683261-12683267	TTATTT	-	4.01
usp	MA0016.1	chr3R:12683384-12683393	TGGTGAGGG	-	4.39

Enhancer Sequence

GAAAAAATAT TTTGGCCTCT TATTTTTTTT TTTTGTATCT TCAAGATGCC GGTGTTCAAG 60
CCGTCGAACC TCAGCTGGAA ACTTGTGCTC AAATCGAGAA TACAAAGTAT CTCGGAGATA 120
CGCCAGCACG ATGAGAAGGA GGTGGTGAGG GTATATGGCA AAGAGGGCAC GCAACGAAGG 180
AGATAACGAA ACCAAACACG AAACTCGCTC GACAACAACA AGCAAATGAA TTTATGAGCA 240
TGCCCAGCTC TCTTTTTCTC TTCTCTCTCT CTCTGCTTCT CCGTCTCAGT TTCTACTGTT 300
CTCCCTCCTG CACACTTCTA TACAAACAAT ATCGTATTGA AATATTTCAA CAATGGCCGC 360
TGCGAAGGAG CAGGCAAAGC AGAGAGCGAG AACATTTAAT TCGGCCATAT TTGATTTTGA 420
TTTTGGACAT GCTGTCATTG CTCTCGATTT TCGGGGTGGG TTTTCGGTAT CGGTATCTCC 480
AGTGCGTCTG CTCCGTTCAT CTTTGTACAT TTGTATCTGT ATCTGCAGCC GGTTCCGCCG 540
GCAAAATGAG ATGGCTTTAA CTTTAACCTC TGGCGCAATT TCCCGGCTCA TGACTTTTTC 600
GGGCACAATC TTGGCATGTT AATCCCTTAT TAATTTTACG ATCTACGCAA CTGGGGAGCT 660
GTGGTTCCAA CACGTCTTTA AAGACACATA AATCAATTTC ATATCGCCTG GAATTGAGCC 720
TACCTATTGT ATATATT 737