EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


Cortex | Mus musculus

Cell type: Thin layer cell of the brain | Tissue: Brain.

The tissue/cell type 'Cortex' in Mus musculus contains 6374 enhancers. Enhancers

Show: chr1>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
MM032-00001chr1:4483120-448318000--
MM032-00002chr1:4483570-448373000--
MM032-00003chr1:4775590-477565000--
MM032-00004chr1:4848050-484840001--
MM032-00005chr1:5073350-507347000--
MM032-00006chr1:6205030-620552000--
MM032-00007chr1:7079290-707965000--
MM032-00008chr1:9591730-959197001--
MM032-00009chr1:9933890-993410000--
MM032-00010chr1:13362530-1336318004dbSUPER
MM032-00011chr1:13363460-1336401001dbSUPER
MM032-00012chr1:15276480-1527772003--
MM032-00013chr1:15796030-1579617000--
MM032-00014chr1:16094250-1609444000dbSUPER
MM032-00015chr1:16608700-1660931000--
MM032-00016chr1:16646610-1664690000--
MM032-00017chr1:16655580-1665570000--
MM032-00018chr1:17135660-1713587000--
MM032-00019chr1:18627360-1862758000--
MM032-00020chr1:20941870-2094231000--
MM032-00021chr1:21950470-2195122000--
MM032-00022chr1:23263050-2326357002--
MM032-00023chr1:23928430-2392887000--
MM032-00024chr1:24012180-2401238000--
MM032-00025chr1:24593460-2459402000--
MM032-00026chr1:25285120-2528526000--
MM032-00027chr1:25285390-2528624000--
MM032-00028chr1:30930430-3093117004--
MM032-00029chr1:33870650-3387118000--
MM032-00030chr1:34063240-3406393002dbSUPER
MM032-00031chr1:34636610-3463700000--
MM032-00032chr1:34807060-3480774001--
MM032-00033chr1:34858840-3485902004--
MM032-00034chr1:34906900-3490702001--
MM032-00035chr1:36300700-3630091000dbSUPER
MM032-00036chr1:36425750-3642594000--
MM032-00037chr1:36748530-3674899000--
MM032-00038chr1:36766520-3676665000--
MM032-00039chr1:37486580-3748671000--
MM032-00040chr1:37775960-3777641008dbSUPER
MM032-00041chr1:37921370-3792175001--
MM032-00042chr1:38053670-3805395000--
MM032-00043chr1:38185860-3818630001--
MM032-00044chr1:38892440-3889374001--
MM032-00045chr1:39070590-3907130002--
MM032-00046chr1:39234250-3923480001--
MM032-00047chr1:39425100-3942545000--
MM032-00048chr1:39633580-3963367000dbSUPER
MM032-00049chr1:39999490-4000010001dbSUPER
MM032-00050chr1:40046650-4004693000--
MM032-00051chr1:42742770-4274449007dbSUPER
MM032-00052chr1:42750180-4275159006dbSUPER
MM032-00053chr1:43149380-4314972000--
MM032-00054chr1:43154970-4315511000--
MM032-00055chr1:43155700-4315603000--
MM032-00056chr1:43220360-4322054000dbSUPER
MM032-00057chr1:43220800-4322114003dbSUPER
MM032-00058chr1:43884040-4388445000--
MM032-00059chr1:44177110-4417720000--
MM032-00060chr1:44204990-4420519000--
MM032-00061chr1:46908930-4691031003dbSUPER
MM032-00062chr1:52288980-5228943000--
MM032-00063chr1:52783220-5278386003--
MM032-00064chr1:52901980-5290214000--
MM032-00065chr1:53370700-5337089000--
MM032-00066chr1:53841560-5384191000dbSUPER
MM032-00067chr1:54250940-5425181000--
MM032-00068chr1:54614130-5461427000--
MM032-00069chr1:55083560-5508418002--
MM032-00070chr1:55109830-5511007000--
MM032-00071chr1:55144100-5514462000--
MM032-00072chr1:55145250-5514558001--
MM032-00073chr1:55188200-5518871000--
MM032-00074chr1:55463470-5546371001--
MM032-00075chr1:57434790-5743505000--
MM032-00076chr1:57463000-5746322000--
MM032-00077chr1:58450060-5845039002--
MM032-00078chr1:58480130-5848076000--
MM032-00079chr1:58709530-5870984000--
MM032-00080chr1:59029880-5903008000--
MM032-00081chr1:59030690-5903084000--
MM032-00082chr1:59727450-5972752000--
MM032-00083chr1:60154780-6015488000--
MM032-00084chr1:60155340-6015561000--
MM032-00085chr1:60237520-6023793001--
MM032-00086chr1:60400300-6040059000--
MM032-00087chr1:60466760-6046719000--
MM032-00088chr1:60623020-6062340000--
MM032-00089chr1:62751690-6275309001dbSUPER
MM032-00090chr1:63222740-6322300000--
MM032-00091chr1:64165360-6416642000dbSUPER
MM032-00092chr1:64166500-6416732003dbSUPER
MM032-00093chr1:64167400-6416747000dbSUPER
MM032-00094chr1:64579590-6457982001dbSUPER
MM032-00095chr1:64580050-6458039004dbSUPER
MM032-00096chr1:65024990-6502525000--
MM032-00097chr1:65380400-6538162002--
MM032-00098chr1:66368160-6636829002dbSUPER
MM032-00099chr1:66368710-6636889000dbSUPER
MM032-00100chr1:66433460-6643379000--
MM032-00101chr1:66747600-6674768000--
MM032-00102chr1:66862690-6686353001--
MM032-00103chr1:67084980-6708506000--
MM032-00104chr1:72272410-7227304004dbSUPER
MM032-00105chr1:72283010-7228375001dbSUPER
MM032-00106chr1:72290410-7229104006dbSUPER
MM032-00107chr1:72301260-7230191006dbSUPER
MM032-00108chr1:72630010-7263023001--
MM032-00109chr1:72916970-7291790005--
MM032-00110chr1:72918030-72919020012--
MM032-00111chr1:74074250-7407476001dbSUPER
MM032-00112chr1:74286290-7428655000dbSUPER
MM032-00113chr1:74341440-7434177000dbSUPER
MM032-00114chr1:74342010-7434362000dbSUPER
MM032-00115chr1:74350160-7435069000dbSUPER
MM032-00116chr1:74350910-7435116001dbSUPER
MM032-00117chr1:74379360-7437968001--
MM032-00118chr1:74635060-7463517000--
MM032-00119chr1:74647680-7464789001--
MM032-00120chr1:74708460-7470861000--
MM032-00121chr1:74863420-7486410002dbSUPER
MM032-00122chr1:74876790-7487734000--
MM032-00123chr1:74904610-74905910016--
MM032-00124chr1:75137830-7513798000dbSUPER
MM032-00125chr1:75138070-7513863002dbSUPER
MM032-00126chr1:75139850-7513994000dbSUPER
MM032-00127chr1:75189250-7518932000--
MM032-00128chr1:75215160-7521576002dbSUPER
MM032-00129chr1:75233160-7523327000--
MM032-00130chr1:75233520-7523402000--
MM032-00131chr1:75235700-7523585000--
MM032-00132chr1:75235900-7523608001--
MM032-00133chr1:75236200-7523636000--
MM032-00134chr1:75244480-7524467000--
MM032-00135chr1:75244740-7524530000--
MM032-00136chr1:75259930-7526044000--
MM032-00137chr1:75313590-7531390001--
MM032-00138chr1:75378020-7537861000dbSUPER
MM032-00139chr1:75378920-7537971002dbSUPER
MM032-00140chr1:75379750-7537997000dbSUPER
MM032-00141chr1:75380920-7538123000dbSUPER
MM032-00142chr1:75381320-7538140000dbSUPER
MM032-00143chr1:75381730-7538218005dbSUPER
MM032-00144chr1:75382410-75383010010--
MM032-00145chr1:75383490-7538437000dbSUPER
MM032-00146chr1:75476460-7547655000--
MM032-00147chr1:75501600-7550178000dbSUPER
MM032-00148chr1:75542950-7554334000--
MM032-00149chr1:77509050-7750973001--
MM032-00150chr1:77510070-7751097000--
MM032-00151chr1:77511150-7751151000--
MM032-00152chr1:78534110-7853440007dbSUPER
MM032-00153chr1:78654670-7865501000--
MM032-00154chr1:79757890-7975813000dbSUPER
MM032-00155chr1:79772880-7977307000--
MM032-00156chr1:81074460-8107454000--
MM032-00157chr1:82279380-8228009001dbSUPER
MM032-00158chr1:82313220-8231359000--
MM032-00159chr1:82721650-8272195000--
MM032-00160chr1:84691890-8469202000--
MM032-00161chr1:84931200-8493143000--
MM032-00162chr1:88255260-8825578001--
MM032-00163chr1:88330530-8833094001dbSUPER
MM032-00164chr1:88331090-8833255000dbSUPER
MM032-00165chr1:88383640-8838480004dbSUPER
MM032-00166chr1:88400240-8840212001dbSUPER
MM032-00167chr1:88403940-8840537000dbSUPER
MM032-00168chr1:88483810-8848395002--
MM032-00169chr1:88600440-8860082000--
MM032-00170chr1:89223660-8922418003--
MM032-00171chr1:89371780-8937190004--
MM032-00172chr1:89405370-8940581000--
MM032-00173chr1:89405960-8940666000--
MM032-00174chr1:89407040-8940740000--
MM032-00175chr1:89904410-8990501000--
MM032-00176chr1:93076710-9307786000dbSUPER
MM032-00177chr1:93147010-9314741002--
MM032-00178chr1:93355100-9335574001dbSUPER
MM032-00179chr1:94370010-9437023000--
MM032-00180chr1:94808060-9480819000--
MM032-00181chr1:94996650-9499833001--
MM032-00182chr1:95531370-9553187001--
MM032-00183chr1:95531960-9553212000--
MM032-00184chr1:95651630-9565198000--
MM032-00185chr1:95722150-9572269000--
MM032-00186chr1:97210820-9721098000--
MM032-00187chr1:99558150-9955840000--
MM032-00188chr1:99873290-9987343000--
MM032-00189chr1:99873830-9987407000--
MM032-00190chr1:106665470-10666634004--
MM032-00191chr1:108655580-10865612000--
MM032-00192chr1:111879620-11187987000--
MM032-00193chr1:120286520-12028690000--
MM032-00194chr1:122016790-12201733000dbSUPER
MM032-00195chr1:123223980-12322409000--
MM032-00196chr1:123224600-12322505000--
MM032-00197chr1:127331240-12733186001--
MM032-00198chr1:127457860-12745824000--
MM032-00199chr1:129102000-12910331001dbSUPER
MM032-00200chr1:129670960-12967133000--
MM032-00201chr1:129765400-12976550000--
MM032-00202chr1:129765550-12976580001--
MM032-00203chr1:130313280-13031372004--
MM032-00204chr1:132612120-13261229002dbSUPER
MM032-00205chr1:132612390-13261303004dbSUPER
MM032-00206chr1:132613620-13261390003dbSUPER
MM032-00207chr1:133422770-13342380001--
MM032-00208chr1:133807320-13380776000--
MM032-00209chr1:133904510-13390464000dbSUPER
MM032-00210chr1:133904690-13390528001dbSUPER
MM032-00211chr1:133964020-13396423000--
MM032-00212chr1:134096550-13409714001dbSUPER
MM032-00213chr1:134098540-13409950000dbSUPER
MM032-00214chr1:134261010-13426150000dbSUPER
MM032-00215chr1:134270900-13427234002dbSUPER
MM032-00216chr1:134282360-13428345003dbSUPER
MM032-00217chr1:134284240-13428503001dbSUPER
MM032-00218chr1:134314440-13431468000--
MM032-00219chr1:134403070-13440340001--
MM032-00220chr1:134434570-13443510001dbSUPER
MM032-00221chr1:134439090-13443929000dbSUPER
MM032-00222chr1:134637580-13463824000--
MM032-00223chr1:134777250-13477880003--
MM032-00224chr1:134921720-13492182000--
MM032-00225chr1:135780690-13578128000--
MM032-00226chr1:135782980-13578428003--
MM032-00227chr1:135957170-13595826000dbSUPER
MM032-00228chr1:135989290-13599053001dbSUPER
MM032-00229chr1:135994850-13599636000dbSUPER
MM032-00230chr1:136128870-13613059005dbSUPER
MM032-00231chr1:136240870-13624168007dbSUPER
MM032-00232chr1:136457110-13645753000dbSUPER
MM032-00233chr1:137043670-13704453002--
MM032-00234chr1:137180030-13718013000--
MM032-00235chr1:137209960-13721027000--
MM032-00236chr1:137265490-13726662006dbSUPER
MM032-00237chr1:137270710-13727095000--
MM032-00238chr1:137271120-13727146000--
MM032-00239chr1:137282050-13728219000--
MM032-00240chr1:137479600-13748033000--
MM032-00241chr1:137625850-13762757002dbSUPER
MM032-00242chr1:137630120-13763124000dbSUPER
MM032-00243chr1:137952450-13795362008--
MM032-00244chr1:138028330-13802868001dbSUPER
MM032-00245chr1:138036600-13803751001dbSUPER
MM032-00246chr1:138037810-13803967008dbSUPER
MM032-00247chr1:138040260-13804084000dbSUPER
MM032-00248chr1:138312090-13831215000--
MM032-00249chr1:139794900-13979565000dbSUPER
MM032-00250chr1:139796910-13979772001dbSUPER
MM032-00251chr1:140752860-14075315001--
MM032-00252chr1:144549140-14454937001--
MM032-00253chr1:145850610-14585113000dbSUPER
MM032-00254chr1:148344240-14834481005--
MM032-00255chr1:148344870-14834539000--
MM032-00256chr1:151947400-15194754000--
MM032-00257chr1:153191880-15319244000dbSUPER
MM032-00258chr1:153276230-15327635000--
MM032-00259chr1:153602850-15360296000--
MM032-00260chr1:154613990-15461451001--
MM032-00261chr1:154749510-15474963000dbSUPER
MM032-00262chr1:154802320-15480249000--
MM032-00263chr1:155333840-15533466002--
MM032-00264chr1:155500480-15550078000--
MM032-00265chr1:155747180-15574902009dbSUPER
MM032-00266chr1:155756870-155759300012--
MM032-00267chr1:156875920-15687730003dbSUPER
MM032-00268chr1:156930090-15693053000dbSUPER
MM032-00269chr1:157048580-15704906000--
MM032-00270chr1:157264090-15726429001--
MM032-00271chr1:157819850-15781997001--
MM032-00272chr1:158489530-15848969000--
MM032-00273chr1:159373040-15937373001--
MM032-00274chr1:159374140-15937516002--
MM032-00275chr1:159400630-15940074000--
MM032-00276chr1:159400920-15940110000--
MM032-00277chr1:159414020-15941454000--
MM032-00278chr1:161454340-16145472001--
MM032-00279chr1:161544880-16154558001--
MM032-00280chr1:162142480-16214277000--
MM032-00281chr1:162281160-16228135000--
MM032-00282chr1:162281700-16228240001--
MM032-00283chr1:162836830-16283701000--
MM032-00284chr1:163061230-16306149000--
MM032-00285chr1:163072970-16307320000--
MM032-00286chr1:163180720-16318115001--
MM032-00287chr1:164501010-16450145000dbSUPER
MM032-00288chr1:164788800-16478920001--
MM032-00289chr1:165925200-16592530000--
MM032-00290chr1:166972370-16697301000dbSUPER
MM032-00291chr1:167014020-16701460002dbSUPER
MM032-00292chr1:167166540-16716686001--
MM032-00293chr1:167391640-16739184000dbSUPER
MM032-00294chr1:167548170-16754895000--
MM032-00295chr1:168309600-16830983000--
MM032-00296chr1:168339600-16833983000--
MM032-00297chr1:169214310-16921490000dbSUPER
MM032-00298chr1:171677210-17167761000--
MM032-00299chr1:172104750-17210488000--
MM032-00300chr1:172185620-172185960013--
MM032-00301chr1:172974570-17297494000--
MM032-00302chr1:173080290-17308068000--
MM032-00303chr1:173200540-17320075001dbSUPER
MM032-00304chr1:173217540-17321789000--
MM032-00305chr1:173224070-17322462001--
MM032-00306chr1:173224660-17322476000--
MM032-00307chr1:173224950-17322505000--
MM032-00308chr1:173341570-17334181001--
MM032-00309chr1:174012370-17401265001--
MM032-00310chr1:174078290-17407891000--
MM032-00311chr1:174136220-17413672001dbSUPER
MM032-00312chr1:174226020-17422801002dbSUPER
MM032-00313chr1:174242720-17424478001dbSUPER
MM032-00314chr1:174248570-17424868000dbSUPER
MM032-00315chr1:174249550-17424971000dbSUPER
MM032-00316chr1:174253320-17425426000dbSUPER
MM032-00317chr1:174255640-17425583000dbSUPER
MM032-00318chr1:174258450-17425926000dbSUPER
MM032-00319chr1:175296870-17529744000--
MM032-00320chr1:176433720-17643389000--
MM032-00321chr1:177249360-17724956000--
MM032-00322chr1:177422000-17742239001--
MM032-00323chr1:179188890-17918938001--
MM032-00324chr1:179726180-17972634000--
MM032-00325chr1:180249330-18025187002--
MM032-00326chr1:180266970-18026708000dbSUPER
MM032-00327chr1:180298670-18029979001--
MM032-00328chr1:181476740-18147695000dbSUPER
MM032-00329chr1:182499280-18249964001--
MM032-00330chr1:182742530-18274292000--
MM032-00331chr1:182743110-18274360000--
MM032-00332chr1:182781420-18278158000dbSUPER
MM032-00333chr1:182834660-18283483000--
MM032-00334chr1:183081190-18308153000--
MM032-00335chr1:183771860-18377241002dbSUPER
MM032-00336chr1:183949420-18394966000--
MM032-00337chr1:186669270-18666942000dbSUPER
MM032-00338chr1:187028230-18702839000--
MM032-00339chr1:187152820-18715289000--
MM032-00340chr1:187156140-18715627000--
MM032-00341chr1:187187120-18718732000--
MM032-00342chr1:187940790-18794103001--
MM032-00343chr1:191167580-19116786000--
MM032-00344chr1:191745750-19174598000dbSUPER
MM032-00345chr1:192735250-19273543000--
MM032-00346chr1:192850440-19285054000--
MM032-00347chr1:193006600-19300697000dbSUPER
MM032-00348chr1:193047660-19304886003dbSUPER
MM032-00349chr1:193293500-19329488003dbSUPER
MM032-00350chr1:193364470-19336458000--
MM032-00351chr1:193435670-19343573000--
MM032-00352chr1:193435940-19343604000--
MM032-00353chr1:193544300-19354479000--
MM032-00354chr1:193610550-19361187003--
MM032-00355chr1:193730540-19373065003--
MM032-00356chr1:193813800-193814260012--
MM032-00357chr1:193962040-19396272000--
MM032-00358chr1:194596180-19459717002--
MM032-00359chr1:194999970-19500005000dbSUPER
MM032-00360chr1:195176830-19517718001--
MM032-00361chr1:195177290-19517739000--
MM032-00362chr1:196446590-19644720000dbSUPER
MM032-00363chr1:196765230-19676554000dbSUPER
MM032-00364chr1:196843740-19684450002--
MM032-00365chr1:196845330-19684583000--